Gene : Pp3c21_11820 P. patens v3.3
Defline:  (1 of 86) PTHR23257:SF454 - SERINE/THREONINE-PROTEIN KINASE QKGA-RELATED Genomic Order:  556
Name:  ? Pp3c21_11820 Secondary Identifier:  ? PAC:32916879
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c21_11820 0.5kb upstream 0.5kb upstream 6815 true Chr21: 7563139-7569953 Physcomitrium patens
Pp3c21_11820 0.5kb upstream 0.5kb upstream 500 false Chr21: 7569454-7569953 Physcomitrium patens
Pp3c21_11820 0.5kb downstream 0.5kb downstream 6815 true Chr21: 7562639-7569453 Physcomitrium patens
Pp3c21_11820 0.5kb downstream 0.5kb downstream 500 false Chr21: 7562639-7563138 Physcomitrium patens
Pp3c21_11820 1.0kb upstream 1.0kb upstream 7315 true Chr21: 7563139-7570453 Physcomitrium patens
Pp3c21_11820 1.0kb upstream 1.0kb upstream 1000 false Chr21: 7569454-7570453 Physcomitrium patens
Pp3c21_11820 1.0kb downstream 1.0kb downstream 7315 true Chr21: 7562139-7569453 Physcomitrium patens
Pp3c21_11820 1.0kb downstream 1.0kb downstream 1000 false Chr21: 7562139-7563138 Physcomitrium patens
Pp3c21_11820 2.0kb upstream 2.0kb upstream 8315 true Chr21: 7563139-7571453 Physcomitrium patens
Pp3c21_11820 2.0kb upstream 2.0kb upstream 2000 false Chr21: 7569454-7571453 Physcomitrium patens
Pp3c21_11820 2.0kb downstream 2.0kb downstream 8315 true Chr21: 7561139-7569453 Physcomitrium patens
Pp3c21_11820 2.0kb downstream 2.0kb downstream 2000 false Chr21: 7561139-7563138 Physcomitrium patens
Pp3c21_11820 5.0kb upstream 5.0kb upstream 11315 true Chr21: 7563139-7574453 Physcomitrium patens
Pp3c21_11820 5.0kb upstream 5.0kb upstream 5000 false Chr21: 7569454-7574453 Physcomitrium patens
Pp3c21_11820 5.0kb downstream 5.0kb downstream 11315 true Chr21: 7558139-7569453 Physcomitrium patens
Pp3c21_11820 5.0kb downstream 5.0kb downstream 5000 false Chr21: 7558139-7563138 Physcomitrium patens
Pp3c21_11820 10.0kb upstream 10.0kb upstream 16315 true Chr21: 7563139-7579453 Physcomitrium patens
Pp3c21_11820 10.0kb upstream 10.0kb upstream 10000 false Chr21: 7569454-7579453 Physcomitrium patens
Pp3c21_11820 10.0kb downstream 10.0kb downstream 16315 true Chr21: 7553139-7569453 Physcomitrium patens
Pp3c21_11820 10.0kb downstream 10.0kb downstream 10000 false Chr21: 7553139-7563138 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121343304 5274 Embryophyte View MSA
123379585 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.648        
cufflinks 3.847        
cufflinks 3.204        
cufflinks 1.901        
cufflinks 0.366       Low
cufflinks 4.932       High
cufflinks 3.405        
cufflinks 3.462        
cufflinks 1.371       Low
cufflinks 1.956        
cufflinks 4.285       High
cufflinks 1.785        
cufflinks 4.032        
cufflinks 1.355       Low
cufflinks 2.015        
cufflinks 1.317       Low
cufflinks 3.059        
cufflinks 1.397       Low
cufflinks 2.415        
cufflinks 1.328       Low
cufflinks 2.036        
cufflinks 3.781        
cufflinks 1.329       Low
cufflinks 3.884        
cufflinks 2.407        
cufflinks 2.379        
cufflinks 3.143        
cufflinks 6.094       High
cufflinks 3.053        
cufflinks 3.469        

0 Strain