Gene : Pp3c21_6450 P. patens v3.3
Defline:  (1 of 2) PTHR14503:SF3 - 50S RIBOSOMAL PROTEIN L34, CHLOROPLASTIC Genomic Order:  279
Name:  ? Pp3c21_6450 Secondary Identifier:  ? PAC:32914448
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c21_6450 0.5kb upstream 0.5kb upstream 1767 true Chr21: 3905035-3906801 Physcomitrium patens
Pp3c21_6450 0.5kb upstream 0.5kb upstream 500 false Chr21: 3906302-3906801 Physcomitrium patens
Pp3c21_6450 0.5kb downstream 0.5kb downstream 1767 true Chr21: 3904535-3906301 Physcomitrium patens
Pp3c21_6450 0.5kb downstream 0.5kb downstream 500 false Chr21: 3904535-3905034 Physcomitrium patens
Pp3c21_6450 1.0kb upstream 1.0kb upstream 2267 true Chr21: 3905035-3907301 Physcomitrium patens
Pp3c21_6450 1.0kb upstream 1.0kb upstream 1000 false Chr21: 3906302-3907301 Physcomitrium patens
Pp3c21_6450 1.0kb downstream 1.0kb downstream 2267 true Chr21: 3904035-3906301 Physcomitrium patens
Pp3c21_6450 1.0kb downstream 1.0kb downstream 1000 false Chr21: 3904035-3905034 Physcomitrium patens
Pp3c21_6450 2.0kb upstream 2.0kb upstream 3267 true Chr21: 3905035-3908301 Physcomitrium patens
Pp3c21_6450 2.0kb upstream 2.0kb upstream 2000 false Chr21: 3906302-3908301 Physcomitrium patens
Pp3c21_6450 2.0kb downstream 2.0kb downstream 3267 true Chr21: 3903035-3906301 Physcomitrium patens
Pp3c21_6450 2.0kb downstream 2.0kb downstream 2000 false Chr21: 3903035-3905034 Physcomitrium patens
Pp3c21_6450 5.0kb upstream 5.0kb upstream 6267 true Chr21: 3905035-3911301 Physcomitrium patens
Pp3c21_6450 5.0kb upstream 5.0kb upstream 5000 false Chr21: 3906302-3911301 Physcomitrium patens
Pp3c21_6450 5.0kb downstream 5.0kb downstream 6267 true Chr21: 3900035-3906301 Physcomitrium patens
Pp3c21_6450 5.0kb downstream 5.0kb downstream 5000 false Chr21: 3900035-3905034 Physcomitrium patens
Pp3c21_6450 10.0kb upstream 10.0kb upstream 11267 true Chr21: 3905035-3916301 Physcomitrium patens
Pp3c21_6450 10.0kb upstream 10.0kb upstream 10000 false Chr21: 3906302-3916301 Physcomitrium patens
Pp3c21_6450 10.0kb downstream 10.0kb downstream 11267 true Chr21: 3895035-3906301 Physcomitrium patens
Pp3c21_6450 10.0kb downstream 10.0kb downstream 10000 false Chr21: 3895035-3905034 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121344313 5274 Embryophyte View MSA
123425891 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.043        
cufflinks 24.396     High  
cufflinks 8.873        
cufflinks 16.883        
cufflinks 9.039        
cufflinks 9.404        
cufflinks 21.256     High  
cufflinks 5.098        
cufflinks 22.888     High  
cufflinks 3.157        
cufflinks 10.46        
cufflinks 12.389        
cufflinks 3.283        
cufflinks 18.352        
cufflinks 14.353        
cufflinks 12.214        
cufflinks 34.154     High High
cufflinks 17.249        
cufflinks 0.129       Low
cufflinks 13.507        
cufflinks 12.523        
cufflinks 1.619       Low
cufflinks 9.282        
cufflinks 0.155       Low
cufflinks 7.476        
cufflinks 21.065     High  
cufflinks 11.943        
cufflinks 4.555        
cufflinks 1.785       Low
cufflinks 8.554        

0 Strain