Gene : Pp3c23_12490 P. patens v3.3
Genomic Order:  519 Name:  ? Pp3c23_12490
Secondary Identifier:  ? PAC:32948977
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c23_12490 0.5kb upstream 0.5kb upstream 6252 true Chr23: 8447314-8453565 Physcomitrium patens
Pp3c23_12490 0.5kb upstream 0.5kb upstream 500 false Chr23: 8447314-8447813 Physcomitrium patens
Pp3c23_12490 0.5kb downstream 0.5kb downstream 6252 true Chr23: 8447814-8454065 Physcomitrium patens
Pp3c23_12490 0.5kb downstream 0.5kb downstream 500 false Chr23: 8453566-8454065 Physcomitrium patens
Pp3c23_12490 1.0kb upstream 1.0kb upstream 6752 true Chr23: 8446814-8453565 Physcomitrium patens
Pp3c23_12490 1.0kb upstream 1.0kb upstream 1000 false Chr23: 8446814-8447813 Physcomitrium patens
Pp3c23_12490 1.0kb downstream 1.0kb downstream 6752 true Chr23: 8447814-8454565 Physcomitrium patens
Pp3c23_12490 1.0kb downstream 1.0kb downstream 1000 false Chr23: 8453566-8454565 Physcomitrium patens
Pp3c23_12490 2.0kb upstream 2.0kb upstream 7752 true Chr23: 8445814-8453565 Physcomitrium patens
Pp3c23_12490 2.0kb upstream 2.0kb upstream 2000 false Chr23: 8445814-8447813 Physcomitrium patens
Pp3c23_12490 2.0kb downstream 2.0kb downstream 7752 true Chr23: 8447814-8455565 Physcomitrium patens
Pp3c23_12490 2.0kb downstream 2.0kb downstream 2000 false Chr23: 8453566-8455565 Physcomitrium patens
Pp3c23_12490 5.0kb upstream 5.0kb upstream 10752 true Chr23: 8442814-8453565 Physcomitrium patens
Pp3c23_12490 5.0kb upstream 5.0kb upstream 5000 false Chr23: 8442814-8447813 Physcomitrium patens
Pp3c23_12490 5.0kb downstream 5.0kb downstream 10752 true Chr23: 8447814-8458565 Physcomitrium patens
Pp3c23_12490 5.0kb downstream 5.0kb downstream 5000 false Chr23: 8453566-8458565 Physcomitrium patens
Pp3c23_12490 10.0kb upstream 10.0kb upstream 15752 true Chr23: 8437814-8453565 Physcomitrium patens
Pp3c23_12490 10.0kb upstream 10.0kb upstream 10000 false Chr23: 8437814-8447813 Physcomitrium patens
Pp3c23_12490 10.0kb downstream 10.0kb downstream 15752 true Chr23: 8447814-8463565 Physcomitrium patens
Pp3c23_12490 10.0kb downstream 10.0kb downstream 10000 false Chr23: 8453566-8463565 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121344412 5274 Embryophyte View MSA
123380039 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.129        
cufflinks 5.248        
cufflinks 5.63        
cufflinks 6.478        
cufflinks 7.043        
cufflinks 13.669       High
cufflinks 3.606       Low
cufflinks 5.999        
cufflinks 9.249       High
cufflinks 5.551        
cufflinks 6.541        
cufflinks 4.289       Low
cufflinks 5.891        
cufflinks 4.031       Low
cufflinks 10.172       High
cufflinks 6.854        
cufflinks 8.873        
cufflinks 6.199        
cufflinks 5.148        
cufflinks 9.221       High
cufflinks 9.45       High
cufflinks 6.201        
cufflinks 7.812        
cufflinks 4.498       Low
cufflinks 7.018        
cufflinks 6.6        
cufflinks 6.036        
cufflinks 8.269        
cufflinks 11.436       High
cufflinks 4.968        

0 Strain