Gene : Pp3c24_14440 P. patens v3.3
Defline:  (1 of 4) PTHR10857//PTHR10857:SF11 - COPINE Genomic Order:  653
Name:  ? Pp3c24_14440 Secondary Identifier:  ? PAC:32908817
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c24_14440 0.5kb upstream 0.5kb upstream 3898 true Chr24: 9572430-9576327 Physcomitrium patens
Pp3c24_14440 0.5kb upstream 0.5kb upstream 500 false Chr24: 9572430-9572929 Physcomitrium patens
Pp3c24_14440 0.5kb downstream 0.5kb downstream 3898 true Chr24: 9572930-9576827 Physcomitrium patens
Pp3c24_14440 0.5kb downstream 0.5kb downstream 500 false Chr24: 9576328-9576827 Physcomitrium patens
Pp3c24_14440 1.0kb upstream 1.0kb upstream 4398 true Chr24: 9571930-9576327 Physcomitrium patens
Pp3c24_14440 1.0kb upstream 1.0kb upstream 1000 false Chr24: 9571930-9572929 Physcomitrium patens
Pp3c24_14440 1.0kb downstream 1.0kb downstream 4398 true Chr24: 9572930-9577327 Physcomitrium patens
Pp3c24_14440 1.0kb downstream 1.0kb downstream 1000 false Chr24: 9576328-9577327 Physcomitrium patens
Pp3c24_14440 2.0kb upstream 2.0kb upstream 5398 true Chr24: 9570930-9576327 Physcomitrium patens
Pp3c24_14440 2.0kb upstream 2.0kb upstream 2000 false Chr24: 9570930-9572929 Physcomitrium patens
Pp3c24_14440 2.0kb downstream 2.0kb downstream 5398 true Chr24: 9572930-9578327 Physcomitrium patens
Pp3c24_14440 2.0kb downstream 2.0kb downstream 2000 false Chr24: 9576328-9578327 Physcomitrium patens
Pp3c24_14440 5.0kb upstream 5.0kb upstream 8398 true Chr24: 9567930-9576327 Physcomitrium patens
Pp3c24_14440 5.0kb upstream 5.0kb upstream 5000 false Chr24: 9567930-9572929 Physcomitrium patens
Pp3c24_14440 5.0kb downstream 5.0kb downstream 8398 true Chr24: 9572930-9581327 Physcomitrium patens
Pp3c24_14440 5.0kb downstream 5.0kb downstream 5000 false Chr24: 9576328-9581327 Physcomitrium patens
Pp3c24_14440 10.0kb upstream 10.0kb upstream 13398 true Chr24: 9562930-9576327 Physcomitrium patens
Pp3c24_14440 10.0kb upstream 10.0kb upstream 10000 false Chr24: 9562930-9572929 Physcomitrium patens
Pp3c24_14440 10.0kb downstream 10.0kb downstream 13398 true Chr24: 9572930-9586327 Physcomitrium patens
Pp3c24_14440 10.0kb downstream 10.0kb downstream 10000 false Chr24: 9576328-9586327 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121350791 5274 Embryophyte View MSA
123424237 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.235       High
cufflinks 0.345        
cufflinks 0.578        
cufflinks 0.397        
cufflinks 0.331        
cufflinks 0.288       Low
cufflinks 0.274       Low
cufflinks 1.321        
cufflinks 2.217       High
cufflinks 4.252       High
cufflinks 0.785        
cufflinks 1.35        
cufflinks 0.473        
cufflinks 0.587        
cufflinks 0.604        
cufflinks 0.373        
cufflinks 0.471        
cufflinks 0.403        
cufflinks 0.456        
cufflinks 1.257        
cufflinks 0.592        
cufflinks 3.765       High
cufflinks 0.382        
cufflinks 0.465        
cufflinks 0.249       Low
cufflinks 0.391        
cufflinks 0.593        
cufflinks 0.46        
cufflinks 1.092        
cufflinks 0.56        

0 Strain