Gene : Pp3c24_30 P. patens v3.3
Defline:  (1 of 3) PF00122//PF00689//PF00690//PF00702 - E1-E2 ATPase (E1-E2_ATPase) // Cation transporting ATPase, C-terminus (Cation_ATPase_C) // Cation transporter/ATPase, N-terminus (Cation_ATPase_N) // haloacid dehalogenase-like hydrolase (Hydrolase) Genomic Order:  3
Name:  ? Pp3c24_30 Secondary Identifier:  ? PAC:32909447
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c24_30 0.5kb upstream 0.5kb upstream 5549 true Chr24: 14635-20183 Physcomitrium patens
Pp3c24_30 0.5kb upstream 0.5kb upstream 500 false Chr24: 19684-20183 Physcomitrium patens
Pp3c24_30 0.5kb downstream 0.5kb downstream 5549 true Chr24: 14135-19683 Physcomitrium patens
Pp3c24_30 0.5kb downstream 0.5kb downstream 500 false Chr24: 14135-14634 Physcomitrium patens
Pp3c24_30 1.0kb upstream 1.0kb upstream 6049 true Chr24: 14635-20683 Physcomitrium patens
Pp3c24_30 1.0kb upstream 1.0kb upstream 1000 false Chr24: 19684-20683 Physcomitrium patens
Pp3c24_30 1.0kb downstream 1.0kb downstream 6049 true Chr24: 13635-19683 Physcomitrium patens
Pp3c24_30 1.0kb downstream 1.0kb downstream 1000 false Chr24: 13635-14634 Physcomitrium patens
Pp3c24_30 2.0kb upstream 2.0kb upstream 7049 true Chr24: 14635-21683 Physcomitrium patens
Pp3c24_30 2.0kb upstream 2.0kb upstream 2000 false Chr24: 19684-21683 Physcomitrium patens
Pp3c24_30 2.0kb downstream 2.0kb downstream 7049 true Chr24: 12635-19683 Physcomitrium patens
Pp3c24_30 2.0kb downstream 2.0kb downstream 2000 false Chr24: 12635-14634 Physcomitrium patens
Pp3c24_30 5.0kb upstream 5.0kb upstream 10049 true Chr24: 14635-24683 Physcomitrium patens
Pp3c24_30 5.0kb upstream 5.0kb upstream 5000 false Chr24: 19684-24683 Physcomitrium patens
Pp3c24_30 5.0kb downstream 5.0kb downstream 10049 true Chr24: 9635-19683 Physcomitrium patens
Pp3c24_30 5.0kb downstream 5.0kb downstream 5000 false Chr24: 9635-14634 Physcomitrium patens
Pp3c24_30 10.0kb upstream 10.0kb upstream 15049 true Chr24: 14635-29683 Physcomitrium patens
Pp3c24_30 10.0kb upstream 10.0kb upstream 10000 false Chr24: 19684-29683 Physcomitrium patens
Pp3c24_30 10.0kb downstream 10.0kb downstream 15049 true Chr24: 4635-19683 Physcomitrium patens
Pp3c24_30 10.0kb downstream 10.0kb downstream 10000 false Chr24: 4635-14634 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121352041 5274 Embryophyte View MSA
123427421 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.894     High  
cufflinks 2.67       Low
cufflinks 5.781       Low
cufflinks 2.655       Low
cufflinks 20.611        
cufflinks 125.735     High High
cufflinks 402.518     High High
cufflinks 12.776        
cufflinks 8.279        
cufflinks 324.546     High High
cufflinks 16.534        
cufflinks 179.394     High High
cufflinks 8.352        
cufflinks 26.63     High  
cufflinks 98.398     High  
cufflinks 22.698     High  
cufflinks 9.009        
cufflinks 11.877        
cufflinks 30.426     High  
cufflinks 8.343        
cufflinks 611.219     High High
cufflinks 105.568     High  
cufflinks 8.209        
cufflinks 15.605        
cufflinks 65.672     High  
cufflinks 6.219        
cufflinks 162.171     High High
cufflinks 202.693     High High
cufflinks 60.537     High  
cufflinks 5.7       Low

0 Strain