Gene : Pp3c26_500 P. patens v3.3
Defline:  (1 of 8) PTHR16007 - EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED Genomic Order:  31
Name:  ? Pp3c26_500 Secondary Identifier:  ? PAC:32917151
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c26_500 0.5kb upstream 0.5kb upstream 2758 true Chr26: 192594-195351 Physcomitrium patens
Pp3c26_500 0.5kb upstream 0.5kb upstream 500 false Chr26: 192594-193093 Physcomitrium patens
Pp3c26_500 0.5kb downstream 0.5kb downstream 2758 true Chr26: 193094-195851 Physcomitrium patens
Pp3c26_500 0.5kb downstream 0.5kb downstream 500 false Chr26: 195352-195851 Physcomitrium patens
Pp3c26_500 1.0kb upstream 1.0kb upstream 3258 true Chr26: 192094-195351 Physcomitrium patens
Pp3c26_500 1.0kb upstream 1.0kb upstream 1000 false Chr26: 192094-193093 Physcomitrium patens
Pp3c26_500 1.0kb downstream 1.0kb downstream 3258 true Chr26: 193094-196351 Physcomitrium patens
Pp3c26_500 1.0kb downstream 1.0kb downstream 1000 false Chr26: 195352-196351 Physcomitrium patens
Pp3c26_500 2.0kb upstream 2.0kb upstream 4258 true Chr26: 191094-195351 Physcomitrium patens
Pp3c26_500 2.0kb upstream 2.0kb upstream 2000 false Chr26: 191094-193093 Physcomitrium patens
Pp3c26_500 2.0kb downstream 2.0kb downstream 4258 true Chr26: 193094-197351 Physcomitrium patens
Pp3c26_500 2.0kb downstream 2.0kb downstream 2000 false Chr26: 195352-197351 Physcomitrium patens
Pp3c26_500 5.0kb upstream 5.0kb upstream 7258 true Chr26: 188094-195351 Physcomitrium patens
Pp3c26_500 5.0kb upstream 5.0kb upstream 5000 false Chr26: 188094-193093 Physcomitrium patens
Pp3c26_500 5.0kb downstream 5.0kb downstream 7258 true Chr26: 193094-200351 Physcomitrium patens
Pp3c26_500 5.0kb downstream 5.0kb downstream 5000 false Chr26: 195352-200351 Physcomitrium patens
Pp3c26_500 10.0kb upstream 10.0kb upstream 12258 true Chr26: 183094-195351 Physcomitrium patens
Pp3c26_500 10.0kb upstream 10.0kb upstream 10000 false Chr26: 183094-193093 Physcomitrium patens
Pp3c26_500 10.0kb downstream 10.0kb downstream 12258 true Chr26: 193094-205351 Physcomitrium patens
Pp3c26_500 10.0kb downstream 10.0kb downstream 10000 false Chr26: 195352-205351 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121342779 5274 Embryophyte View MSA
123379226 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.917       Low
cufflinks 31.357     High  
cufflinks 50.522     High  
cufflinks 33.623     High  
cufflinks 16.718     High Low
cufflinks 40.406     High  
cufflinks 49.271     High  
cufflinks 49.515     High  
cufflinks 15.393       Low
cufflinks 19.074       Low
cufflinks 81.841     High High
cufflinks 15.115     High Low
cufflinks 56.915     High  
cufflinks 76.285     High High
cufflinks 97.861     High High
cufflinks 26.443     High  
cufflinks 41.87     High  
cufflinks 32.909     High  
cufflinks 42.639     High  
cufflinks 38.316     High  
cufflinks 24.034     High  
cufflinks 14.524       Low
cufflinks 48.721     High  
cufflinks 41.035     High  
cufflinks 65.535     High  
cufflinks 59.747     High  
cufflinks 57.314     High  
cufflinks 28.559     High  
cufflinks 85.976     High High
cufflinks 69.377     High  

0 Strain