Gene : Pp3s32_567 P. patens v3.3
Defline:  (1 of 1) PF13407 - Periplasmic binding protein domain (Peripla_BP_4) Genomic Order:  58
Name:  ? Pp3s32_567 Secondary Identifier:  ? PAC:32948387
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3s32_567 0.5kb upstream 0.5kb upstream 2838 true scaffold_32: 226397-229234 Physcomitrium patens
Pp3s32_567 0.5kb upstream 0.5kb upstream 500 false scaffold_32: 226397-226896 Physcomitrium patens
Pp3s32_567 0.5kb downstream 0.5kb downstream 2838 true scaffold_32: 226897-229734 Physcomitrium patens
Pp3s32_567 0.5kb downstream 0.5kb downstream 500 false scaffold_32: 229235-229734 Physcomitrium patens
Pp3s32_567 1.0kb upstream 1.0kb upstream 3338 true scaffold_32: 225897-229234 Physcomitrium patens
Pp3s32_567 1.0kb upstream 1.0kb upstream 1000 false scaffold_32: 225897-226896 Physcomitrium patens
Pp3s32_567 1.0kb downstream 1.0kb downstream 3338 true scaffold_32: 226897-230234 Physcomitrium patens
Pp3s32_567 1.0kb downstream 1.0kb downstream 1000 false scaffold_32: 229235-230234 Physcomitrium patens
Pp3s32_567 2.0kb upstream 2.0kb upstream 4338 true scaffold_32: 224897-229234 Physcomitrium patens
Pp3s32_567 2.0kb upstream 2.0kb upstream 2000 false scaffold_32: 224897-226896 Physcomitrium patens
Pp3s32_567 2.0kb downstream 2.0kb downstream 4338 true scaffold_32: 226897-231234 Physcomitrium patens
Pp3s32_567 2.0kb downstream 2.0kb downstream 2000 false scaffold_32: 229235-231234 Physcomitrium patens
Pp3s32_567 5.0kb upstream 5.0kb upstream 7338 true scaffold_32: 221897-229234 Physcomitrium patens
Pp3s32_567 5.0kb upstream 5.0kb upstream 5000 false scaffold_32: 221897-226896 Physcomitrium patens
Pp3s32_567 5.0kb downstream 5.0kb downstream 7338 true scaffold_32: 226897-234234 Physcomitrium patens
Pp3s32_567 5.0kb downstream 5.0kb downstream 5000 false scaffold_32: 229235-234234 Physcomitrium patens
Pp3s32_567 10.0kb upstream 10.0kb upstream 12338 true scaffold_32: 216897-229234 Physcomitrium patens
Pp3s32_567 10.0kb upstream 10.0kb upstream 10000 false scaffold_32: 216897-226896 Physcomitrium patens
Pp3s32_567 10.0kb downstream 10.0kb downstream 12338 true scaffold_32: 226897-239234 Physcomitrium patens
Pp3s32_567 10.0kb downstream 10.0kb downstream 10000 false scaffold_32: 229235-239234 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121331370 5274 Embryophyte Singleton cluster - no MSA
123368307 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain