Gene : Pp3s30_700 P. patens v3.3
Defline:  (1 of 1) 2.6.1.82 - Putrescine aminotransferase / Putrescine-alpha-ketoglutarate transaminase Genomic Order:  73
Name:  ? Pp3s30_700 Secondary Identifier:  ? PAC:32948532
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ppatens PWY-6440 Physcomitrium patens pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3s30_700 0.5kb upstream 0.5kb upstream 5759 true scaffold_30: 169893-175651 Physcomitrium patens
Pp3s30_700 0.5kb upstream 0.5kb upstream 500 false scaffold_30: 175152-175651 Physcomitrium patens
Pp3s30_700 0.5kb downstream 0.5kb downstream 5759 true scaffold_30: 169393-175151 Physcomitrium patens
Pp3s30_700 0.5kb downstream 0.5kb downstream 500 false scaffold_30: 169393-169892 Physcomitrium patens
Pp3s30_700 1.0kb upstream 1.0kb upstream 6259 true scaffold_30: 169893-176151 Physcomitrium patens
Pp3s30_700 1.0kb upstream 1.0kb upstream 1000 false scaffold_30: 175152-176151 Physcomitrium patens
Pp3s30_700 1.0kb downstream 1.0kb downstream 6259 true scaffold_30: 168893-175151 Physcomitrium patens
Pp3s30_700 1.0kb downstream 1.0kb downstream 1000 false scaffold_30: 168893-169892 Physcomitrium patens
Pp3s30_700 2.0kb upstream 2.0kb upstream 7259 true scaffold_30: 169893-177151 Physcomitrium patens
Pp3s30_700 2.0kb upstream 2.0kb upstream 2000 false scaffold_30: 175152-177151 Physcomitrium patens
Pp3s30_700 2.0kb downstream 2.0kb downstream 7259 true scaffold_30: 167893-175151 Physcomitrium patens
Pp3s30_700 2.0kb downstream 2.0kb downstream 2000 false scaffold_30: 167893-169892 Physcomitrium patens
Pp3s30_700 5.0kb upstream 5.0kb upstream 10259 true scaffold_30: 169893-180151 Physcomitrium patens
Pp3s30_700 5.0kb upstream 5.0kb upstream 5000 false scaffold_30: 175152-180151 Physcomitrium patens
Pp3s30_700 5.0kb downstream 5.0kb downstream 10259 true scaffold_30: 164893-175151 Physcomitrium patens
Pp3s30_700 5.0kb downstream 5.0kb downstream 5000 false scaffold_30: 164893-169892 Physcomitrium patens
Pp3s30_700 10.0kb upstream 10.0kb upstream 15259 true scaffold_30: 169893-185151 Physcomitrium patens
Pp3s30_700 10.0kb upstream 10.0kb upstream 10000 false scaffold_30: 175152-185151 Physcomitrium patens
Pp3s30_700 10.0kb downstream 10.0kb downstream 15259 true scaffold_30: 159893-175151 Physcomitrium patens
Pp3s30_700 10.0kb downstream 10.0kb downstream 10000 false scaffold_30: 159893-169892 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121331479 5274 Embryophyte Singleton cluster - no MSA
123368408 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain