Gene : Pp3s30_800 P. patens v3.3
Defline:  (1 of 1) PF01497//PF02681 - Periplasmic binding protein (Peripla_BP_2) // Divergent PAP2 family (DUF212) Genomic Order:  82
Name:  ? Pp3s30_800 Secondary Identifier:  ? PAC:32948473
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3s30_800 0.5kb upstream 0.5kb upstream 2097 true scaffold_30: 198243-200339 Physcomitrium patens
Pp3s30_800 0.5kb upstream 0.5kb upstream 500 false scaffold_30: 198243-198742 Physcomitrium patens
Pp3s30_800 0.5kb downstream 0.5kb downstream 2097 true scaffold_30: 198743-200839 Physcomitrium patens
Pp3s30_800 0.5kb downstream 0.5kb downstream 500 false scaffold_30: 200340-200839 Physcomitrium patens
Pp3s30_800 1.0kb upstream 1.0kb upstream 2597 true scaffold_30: 197743-200339 Physcomitrium patens
Pp3s30_800 1.0kb upstream 1.0kb upstream 1000 false scaffold_30: 197743-198742 Physcomitrium patens
Pp3s30_800 1.0kb downstream 1.0kb downstream 2597 true scaffold_30: 198743-201339 Physcomitrium patens
Pp3s30_800 1.0kb downstream 1.0kb downstream 1000 false scaffold_30: 200340-201339 Physcomitrium patens
Pp3s30_800 2.0kb upstream 2.0kb upstream 3597 true scaffold_30: 196743-200339 Physcomitrium patens
Pp3s30_800 2.0kb upstream 2.0kb upstream 2000 false scaffold_30: 196743-198742 Physcomitrium patens
Pp3s30_800 2.0kb downstream 2.0kb downstream 3597 true scaffold_30: 198743-202339 Physcomitrium patens
Pp3s30_800 2.0kb downstream 2.0kb downstream 2000 false scaffold_30: 200340-202339 Physcomitrium patens
Pp3s30_800 5.0kb upstream 5.0kb upstream 6597 true scaffold_30: 193743-200339 Physcomitrium patens
Pp3s30_800 5.0kb upstream 5.0kb upstream 5000 false scaffold_30: 193743-198742 Physcomitrium patens
Pp3s30_800 5.0kb downstream 5.0kb downstream 6597 true scaffold_30: 198743-205339 Physcomitrium patens
Pp3s30_800 5.0kb downstream 5.0kb downstream 5000 false scaffold_30: 200340-205339 Physcomitrium patens
Pp3s30_800 10.0kb upstream 10.0kb upstream 11597 true scaffold_30: 188743-200339 Physcomitrium patens
Pp3s30_800 10.0kb upstream 10.0kb upstream 10000 false scaffold_30: 188743-198742 Physcomitrium patens
Pp3s30_800 10.0kb downstream 10.0kb downstream 11597 true scaffold_30: 198743-210339 Physcomitrium patens
Pp3s30_800 10.0kb downstream 10.0kb downstream 10000 false scaffold_30: 200340-210339 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121331437 5274 Embryophyte Singleton cluster - no MSA
123368369 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain