Gene : Pp3s46_240 P. patens v3.3
Defline:  (1 of 1) 2.4.2.10//3.5.2.3//4.1.1.23//6.3.5.5 - Orotate phosphoribosyltransferase / Orotidylic acid phosphorylase // Dihydroorotase / DHOase // Orotidine-5'-phosphate decarboxylase / Uridine 5'-monophosphate synthase // Carbamoyl-phosphate synthase (glutamine-hydrolyzing) / Glutamine-dependent carbamyl phosphate synthetase Genomic Order:  26
Name:  ? Pp3s46_240 Secondary Identifier:  ? PAC:32948241
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Sequence Feature Displayer

Ontology Annotation Displayer

10 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ppatens ARGSYNBSUB-PWY Physcomitrium patens pathologic  
Ppatens ARGSYN-PWY Physcomitrium patens pathologic  
Ppatens CITRULBIO-PWY Physcomitrium patens pathologic  
Ppatens GLUTAMINDEG-PWY Physcomitrium patens pathologic  
Ppatens PWY0-162 Physcomitrium patens pathologic  
Ppatens PWY-4984 Physcomitrium patens pathologic  
Ppatens PWY-5686 Physcomitrium patens pathologic  
Ppatens PWY-5692 Physcomitrium patens pathologic  
Ppatens PWY-5698 Physcomitrium patens pathologic  
Ppatens PWY-7211 Physcomitrium patens pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3s46_240 0.5kb upstream 0.5kb upstream 19537 true scaffold_46: 47410-66946 Physcomitrium patens
Pp3s46_240 0.5kb upstream 0.5kb upstream 500 false scaffold_46: 66447-66946 Physcomitrium patens
Pp3s46_240 0.5kb downstream 0.5kb downstream 19537 true scaffold_46: 46910-66446 Physcomitrium patens
Pp3s46_240 0.5kb downstream 0.5kb downstream 500 false scaffold_46: 46910-47409 Physcomitrium patens
Pp3s46_240 1.0kb upstream 1.0kb upstream 20037 true scaffold_46: 47410-67446 Physcomitrium patens
Pp3s46_240 1.0kb upstream 1.0kb upstream 1000 false scaffold_46: 66447-67446 Physcomitrium patens
Pp3s46_240 1.0kb downstream 1.0kb downstream 20037 true scaffold_46: 46410-66446 Physcomitrium patens
Pp3s46_240 1.0kb downstream 1.0kb downstream 1000 false scaffold_46: 46410-47409 Physcomitrium patens
Pp3s46_240 2.0kb upstream 2.0kb upstream 21037 true scaffold_46: 47410-68446 Physcomitrium patens
Pp3s46_240 2.0kb upstream 2.0kb upstream 2000 false scaffold_46: 66447-68446 Physcomitrium patens
Pp3s46_240 2.0kb downstream 2.0kb downstream 21037 true scaffold_46: 45410-66446 Physcomitrium patens
Pp3s46_240 2.0kb downstream 2.0kb downstream 2000 false scaffold_46: 45410-47409 Physcomitrium patens
Pp3s46_240 5.0kb upstream 5.0kb upstream 24037 true scaffold_46: 47410-71446 Physcomitrium patens
Pp3s46_240 5.0kb upstream 5.0kb upstream 5000 false scaffold_46: 66447-71446 Physcomitrium patens
Pp3s46_240 5.0kb downstream 5.0kb downstream 24037 true scaffold_46: 42410-66446 Physcomitrium patens
Pp3s46_240 5.0kb downstream 5.0kb downstream 5000 false scaffold_46: 42410-47409 Physcomitrium patens
Pp3s46_240 10.0kb upstream 10.0kb upstream 29037 true scaffold_46: 47410-76446 Physcomitrium patens
Pp3s46_240 10.0kb upstream 10.0kb upstream 10000 false scaffold_46: 66447-76446 Physcomitrium patens
Pp3s46_240 10.0kb downstream 10.0kb downstream 29037 true scaffold_46: 37410-66446 Physcomitrium patens
Pp3s46_240 10.0kb downstream 10.0kb downstream 10000 false scaffold_46: 37410-47409 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121331280 5274 Embryophyte Singleton cluster - no MSA
123368223 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain