Gene : Pp3s34_180 P. patens v3.3
Defline:  (1 of 1) PF00083//PF01546//PF07687 - Sugar (and other) transporter (Sugar_tr) // Peptidase family M20/M25/M40 (Peptidase_M20) // Peptidase dimerisation domain (M20_dimer) Genomic Order:  13
Name:  ? Pp3s34_180 Secondary Identifier:  ? PAC:32948253
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3s34_180 0.5kb upstream 0.5kb upstream 2911 true scaffold_34: 39330-42240 Physcomitrium patens
Pp3s34_180 0.5kb upstream 0.5kb upstream 500 false scaffold_34: 39330-39829 Physcomitrium patens
Pp3s34_180 0.5kb downstream 0.5kb downstream 2911 true scaffold_34: 39830-42740 Physcomitrium patens
Pp3s34_180 0.5kb downstream 0.5kb downstream 500 false scaffold_34: 42241-42740 Physcomitrium patens
Pp3s34_180 1.0kb upstream 1.0kb upstream 3411 true scaffold_34: 38830-42240 Physcomitrium patens
Pp3s34_180 1.0kb upstream 1.0kb upstream 1000 false scaffold_34: 38830-39829 Physcomitrium patens
Pp3s34_180 1.0kb downstream 1.0kb downstream 3411 true scaffold_34: 39830-43240 Physcomitrium patens
Pp3s34_180 1.0kb downstream 1.0kb downstream 1000 false scaffold_34: 42241-43240 Physcomitrium patens
Pp3s34_180 2.0kb upstream 2.0kb upstream 4411 true scaffold_34: 37830-42240 Physcomitrium patens
Pp3s34_180 2.0kb upstream 2.0kb upstream 2000 false scaffold_34: 37830-39829 Physcomitrium patens
Pp3s34_180 2.0kb downstream 2.0kb downstream 4411 true scaffold_34: 39830-44240 Physcomitrium patens
Pp3s34_180 2.0kb downstream 2.0kb downstream 2000 false scaffold_34: 42241-44240 Physcomitrium patens
Pp3s34_180 5.0kb upstream 5.0kb upstream 7411 true scaffold_34: 34830-42240 Physcomitrium patens
Pp3s34_180 5.0kb upstream 5.0kb upstream 5000 false scaffold_34: 34830-39829 Physcomitrium patens
Pp3s34_180 5.0kb downstream 5.0kb downstream 7411 true scaffold_34: 39830-47240 Physcomitrium patens
Pp3s34_180 5.0kb downstream 5.0kb downstream 5000 false scaffold_34: 42241-47240 Physcomitrium patens
Pp3s34_180 10.0kb upstream 10.0kb upstream 12411 true scaffold_34: 29830-42240 Physcomitrium patens
Pp3s34_180 10.0kb upstream 10.0kb upstream 10000 false scaffold_34: 29830-39829 Physcomitrium patens
Pp3s34_180 10.0kb downstream 10.0kb downstream 12411 true scaffold_34: 39830-52240 Physcomitrium patens
Pp3s34_180 10.0kb downstream 10.0kb downstream 10000 false scaffold_34: 42241-52240 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121336558 5274 Embryophyte View MSA
123427442 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain