Gene : Pp3s155_110 P. patens v3.3
Defline:  (1 of 1) PTHR11014//PTHR11014:SF117 - PEPTIDASE M20 FAMILY MEMBER Genomic Order:  10
Name:  ? Pp3s155_110 Secondary Identifier:  ? PAC:32980930
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3s155_110 0.5kb upstream 0.5kb upstream 5835 true scaffold_155: 12327-18161 Physcomitrium patens
Pp3s155_110 0.5kb upstream 0.5kb upstream 500 false scaffold_155: 12327-12826 Physcomitrium patens
Pp3s155_110 0.5kb downstream 0.5kb downstream 5808 true scaffold_155: 12827-18634 Physcomitrium patens
Pp3s155_110 0.5kb downstream 0.5kb downstream 473 false scaffold_155: 18162-18634 Physcomitrium patens
Pp3s155_110 1.0kb upstream 1.0kb upstream 6335 true scaffold_155: 11827-18161 Physcomitrium patens
Pp3s155_110 1.0kb upstream 1.0kb upstream 1000 false scaffold_155: 11827-12826 Physcomitrium patens
Pp3s155_110 1.0kb downstream 1.0kb downstream 5808 true scaffold_155: 12827-18634 Physcomitrium patens
Pp3s155_110 1.0kb downstream 1.0kb downstream 473 false scaffold_155: 18162-18634 Physcomitrium patens
Pp3s155_110 2.0kb upstream 2.0kb upstream 7335 true scaffold_155: 10827-18161 Physcomitrium patens
Pp3s155_110 2.0kb upstream 2.0kb upstream 2000 false scaffold_155: 10827-12826 Physcomitrium patens
Pp3s155_110 2.0kb downstream 2.0kb downstream 5808 true scaffold_155: 12827-18634 Physcomitrium patens
Pp3s155_110 2.0kb downstream 2.0kb downstream 473 false scaffold_155: 18162-18634 Physcomitrium patens
Pp3s155_110 5.0kb upstream 5.0kb upstream 10335 true scaffold_155: 7827-18161 Physcomitrium patens
Pp3s155_110 5.0kb upstream 5.0kb upstream 5000 false scaffold_155: 7827-12826 Physcomitrium patens
Pp3s155_110 5.0kb downstream 5.0kb downstream 5808 true scaffold_155: 12827-18634 Physcomitrium patens
Pp3s155_110 5.0kb downstream 5.0kb downstream 473 false scaffold_155: 18162-18634 Physcomitrium patens
Pp3s155_110 10.0kb upstream 10.0kb upstream 15335 true scaffold_155: 2827-18161 Physcomitrium patens
Pp3s155_110 10.0kb upstream 10.0kb upstream 10000 false scaffold_155: 2827-12826 Physcomitrium patens
Pp3s155_110 10.0kb downstream 10.0kb downstream 5808 true scaffold_155: 12827-18634 Physcomitrium patens
Pp3s155_110 10.0kb downstream 10.0kb downstream 473 false scaffold_155: 18162-18634 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121335506 5274 Embryophyte Singleton cluster - no MSA
123372361 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain