Gene : Pp3s96_50 P. patens v3.3
Defline:  (1 of 1) PTHR30465 - PEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN Genomic Order:  5
Name:  ? Pp3s96_50 Secondary Identifier:  ? PAC:32966544
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3s96_50 0.5kb upstream 0.5kb upstream 1899 true scaffold_96: 21455-23353 Physcomitrium patens
Pp3s96_50 0.5kb upstream 0.5kb upstream 500 false scaffold_96: 21455-21954 Physcomitrium patens
Pp3s96_50 0.5kb downstream 0.5kb downstream 1899 true scaffold_96: 21955-23853 Physcomitrium patens
Pp3s96_50 0.5kb downstream 0.5kb downstream 500 false scaffold_96: 23354-23853 Physcomitrium patens
Pp3s96_50 1.0kb upstream 1.0kb upstream 2399 true scaffold_96: 20955-23353 Physcomitrium patens
Pp3s96_50 1.0kb upstream 1.0kb upstream 1000 false scaffold_96: 20955-21954 Physcomitrium patens
Pp3s96_50 1.0kb downstream 1.0kb downstream 2399 true scaffold_96: 21955-24353 Physcomitrium patens
Pp3s96_50 1.0kb downstream 1.0kb downstream 1000 false scaffold_96: 23354-24353 Physcomitrium patens
Pp3s96_50 2.0kb upstream 2.0kb upstream 3399 true scaffold_96: 19955-23353 Physcomitrium patens
Pp3s96_50 2.0kb upstream 2.0kb upstream 2000 false scaffold_96: 19955-21954 Physcomitrium patens
Pp3s96_50 2.0kb downstream 2.0kb downstream 3399 true scaffold_96: 21955-25353 Physcomitrium patens
Pp3s96_50 2.0kb downstream 2.0kb downstream 2000 false scaffold_96: 23354-25353 Physcomitrium patens
Pp3s96_50 5.0kb upstream 5.0kb upstream 6399 true scaffold_96: 16955-23353 Physcomitrium patens
Pp3s96_50 5.0kb upstream 5.0kb upstream 5000 false scaffold_96: 16955-21954 Physcomitrium patens
Pp3s96_50 5.0kb downstream 5.0kb downstream 6399 true scaffold_96: 21955-28353 Physcomitrium patens
Pp3s96_50 5.0kb downstream 5.0kb downstream 5000 false scaffold_96: 23354-28353 Physcomitrium patens
Pp3s96_50 10.0kb upstream 10.0kb upstream 11399 true scaffold_96: 11955-23353 Physcomitrium patens
Pp3s96_50 10.0kb upstream 10.0kb upstream 10000 false scaffold_96: 11955-21954 Physcomitrium patens
Pp3s96_50 10.0kb downstream 10.0kb downstream 11399 true scaffold_96: 21955-33353 Physcomitrium patens
Pp3s96_50 10.0kb downstream 10.0kb downstream 10000 false scaffold_96: 23354-33353 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121333673 5274 Embryophyte Singleton cluster - no MSA
123370563 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain