Gene : Pp3c1_13260 P. patens v3.3
Defline:  (1 of 2) PTHR21666//PTHR21666:SF196 - PEPTIDASE-RELATED Genomic Order:  632
Name:  ? Pp3c1_13260 Secondary Identifier:  ? PAC:32971998
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

11 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c1_13260 0.5kb upstream 0.5kb upstream 3391 true Chr01: 9700560-9703950 Physcomitrium patens
Pp3c1_13260 0.5kb upstream 0.5kb upstream 500 false Chr01: 9700560-9701059 Physcomitrium patens
Pp3c1_13260 0.5kb downstream 0.5kb downstream 3391 true Chr01: 9701060-9704450 Physcomitrium patens
Pp3c1_13260 0.5kb downstream 0.5kb downstream 500 false Chr01: 9703951-9704450 Physcomitrium patens
Pp3c1_13260 1.0kb upstream 1.0kb upstream 3891 true Chr01: 9700060-9703950 Physcomitrium patens
Pp3c1_13260 1.0kb upstream 1.0kb upstream 1000 false Chr01: 9700060-9701059 Physcomitrium patens
Pp3c1_13260 1.0kb downstream 1.0kb downstream 3891 true Chr01: 9701060-9704950 Physcomitrium patens
Pp3c1_13260 1.0kb downstream 1.0kb downstream 1000 false Chr01: 9703951-9704950 Physcomitrium patens
Pp3c1_13260 2.0kb upstream 2.0kb upstream 4891 true Chr01: 9699060-9703950 Physcomitrium patens
Pp3c1_13260 2.0kb upstream 2.0kb upstream 2000 false Chr01: 9699060-9701059 Physcomitrium patens
Pp3c1_13260 2.0kb downstream 2.0kb downstream 4891 true Chr01: 9701060-9705950 Physcomitrium patens
Pp3c1_13260 2.0kb downstream 2.0kb downstream 2000 false Chr01: 9703951-9705950 Physcomitrium patens
Pp3c1_13260 5.0kb upstream 5.0kb upstream 7891 true Chr01: 9696060-9703950 Physcomitrium patens
Pp3c1_13260 5.0kb upstream 5.0kb upstream 5000 false Chr01: 9696060-9701059 Physcomitrium patens
Pp3c1_13260 5.0kb downstream 5.0kb downstream 7891 true Chr01: 9701060-9708950 Physcomitrium patens
Pp3c1_13260 5.0kb downstream 5.0kb downstream 5000 false Chr01: 9703951-9708950 Physcomitrium patens
Pp3c1_13260 10.0kb upstream 10.0kb upstream 12891 true Chr01: 9691060-9703950 Physcomitrium patens
Pp3c1_13260 10.0kb upstream 10.0kb upstream 10000 false Chr01: 9691060-9701059 Physcomitrium patens
Pp3c1_13260 10.0kb downstream 10.0kb downstream 12891 true Chr01: 9701060-9713950 Physcomitrium patens
Pp3c1_13260 10.0kb downstream 10.0kb downstream 10000 false Chr01: 9703951-9713950 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121343585 5274 Embryophyte View MSA
123427168 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 66.437     High  
cufflinks 95.35     High  
cufflinks 241.991     High High
cufflinks 63.258     High  
cufflinks 67.658     High  
cufflinks 7.517       Low
cufflinks 67.788     High  
cufflinks 90.53     High  
cufflinks 30.085     High Low
cufflinks 46.059     High  
cufflinks 108.004     High  
cufflinks 134.733     High  
cufflinks 80.499     High  
cufflinks 94.433     High  
cufflinks 107.851     High  
cufflinks 84.725     High  
cufflinks 89.917     High  
cufflinks 56.503     High  
cufflinks 53.641     High  
cufflinks 41.601     High  
cufflinks 72.536     High  
cufflinks 237.627     High High
cufflinks 70.52     High  
cufflinks 234.775     High High
cufflinks 8.227       Low
cufflinks 92.758     High  
cufflinks 52.424     High  
cufflinks 74.745     High  
cufflinks 68.191     High  
cufflinks 74.019     High  

0 Strain