Gene : Pp3c1_19310 P. patens v3.3
Defline:  (1 of 1) 6.3.2.12 - Dihydrofolate synthase / H(2)-folate synthetase Genomic Order:  874
Name:  ? Pp3c1_19310 Secondary Identifier:  ? PAC:32970988
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ppatens PWY-6612 Physcomitrium patens pathologic  
Ppatens PWY-6614 Physcomitrium patens pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c1_19310 0.5kb upstream 0.5kb upstream 4907 true Chr01: 14541535-14546441 Physcomitrium patens
Pp3c1_19310 0.5kb upstream 0.5kb upstream 500 false Chr01: 14541535-14542034 Physcomitrium patens
Pp3c1_19310 0.5kb downstream 0.5kb downstream 4907 true Chr01: 14542035-14546941 Physcomitrium patens
Pp3c1_19310 0.5kb downstream 0.5kb downstream 500 false Chr01: 14546442-14546941 Physcomitrium patens
Pp3c1_19310 1.0kb upstream 1.0kb upstream 5407 true Chr01: 14541035-14546441 Physcomitrium patens
Pp3c1_19310 1.0kb upstream 1.0kb upstream 1000 false Chr01: 14541035-14542034 Physcomitrium patens
Pp3c1_19310 1.0kb downstream 1.0kb downstream 5407 true Chr01: 14542035-14547441 Physcomitrium patens
Pp3c1_19310 1.0kb downstream 1.0kb downstream 1000 false Chr01: 14546442-14547441 Physcomitrium patens
Pp3c1_19310 2.0kb upstream 2.0kb upstream 6407 true Chr01: 14540035-14546441 Physcomitrium patens
Pp3c1_19310 2.0kb upstream 2.0kb upstream 2000 false Chr01: 14540035-14542034 Physcomitrium patens
Pp3c1_19310 2.0kb downstream 2.0kb downstream 6407 true Chr01: 14542035-14548441 Physcomitrium patens
Pp3c1_19310 2.0kb downstream 2.0kb downstream 2000 false Chr01: 14546442-14548441 Physcomitrium patens
Pp3c1_19310 5.0kb upstream 5.0kb upstream 9407 true Chr01: 14537035-14546441 Physcomitrium patens
Pp3c1_19310 5.0kb upstream 5.0kb upstream 5000 false Chr01: 14537035-14542034 Physcomitrium patens
Pp3c1_19310 5.0kb downstream 5.0kb downstream 9407 true Chr01: 14542035-14551441 Physcomitrium patens
Pp3c1_19310 5.0kb downstream 5.0kb downstream 5000 false Chr01: 14546442-14551441 Physcomitrium patens
Pp3c1_19310 10.0kb upstream 10.0kb upstream 14407 true Chr01: 14532035-14546441 Physcomitrium patens
Pp3c1_19310 10.0kb upstream 10.0kb upstream 10000 false Chr01: 14532035-14542034 Physcomitrium patens
Pp3c1_19310 10.0kb downstream 10.0kb downstream 14407 true Chr01: 14542035-14556441 Physcomitrium patens
Pp3c1_19310 10.0kb downstream 10.0kb downstream 10000 false Chr01: 14546442-14556441 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121344520 5274 Embryophyte View MSA
123426614 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.423        
cufflinks 1.278       Low
cufflinks 2.249        
cufflinks 3.8        
cufflinks 4.912        
cufflinks 4.819        
cufflinks 9.321       High
cufflinks 5.245        
cufflinks 0.707       Low
cufflinks 4.785        
cufflinks 1.717       Low
cufflinks 3.209        
cufflinks 3.241        
cufflinks 2.655        
cufflinks 5.387        
cufflinks 4.004        
cufflinks 6.169        
cufflinks 5.973        
cufflinks 4.159        
cufflinks 4.186        
cufflinks 0.79       Low
cufflinks 6.503       High
cufflinks 5.599        
cufflinks 4.651        
cufflinks 4.567        
cufflinks 2.086        
cufflinks 3.38        
cufflinks 2.261        
cufflinks 4.711        
cufflinks 3.556        

0 Strain