Gene : Pp3c1_26960 P. patens v3.3
Defline:  (1 of 4) PF00069//PF00092//PF02743 - Protein kinase domain (Pkinase) // von Willebrand factor type A domain (VWA) // Cache domain (Cache_1) Genomic Order:  1275
Name:  ? Pp3c1_26960 Secondary Identifier:  ? PAC:32972023
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c1_26960 0.5kb upstream 0.5kb upstream 6443 true Chr01: 19458239-19464681 Physcomitrium patens
Pp3c1_26960 0.5kb upstream 0.5kb upstream 500 false Chr01: 19458239-19458738 Physcomitrium patens
Pp3c1_26960 0.5kb downstream 0.5kb downstream 6443 true Chr01: 19458739-19465181 Physcomitrium patens
Pp3c1_26960 0.5kb downstream 0.5kb downstream 500 false Chr01: 19464682-19465181 Physcomitrium patens
Pp3c1_26960 1.0kb upstream 1.0kb upstream 6943 true Chr01: 19457739-19464681 Physcomitrium patens
Pp3c1_26960 1.0kb upstream 1.0kb upstream 1000 false Chr01: 19457739-19458738 Physcomitrium patens
Pp3c1_26960 1.0kb downstream 1.0kb downstream 6943 true Chr01: 19458739-19465681 Physcomitrium patens
Pp3c1_26960 1.0kb downstream 1.0kb downstream 1000 false Chr01: 19464682-19465681 Physcomitrium patens
Pp3c1_26960 2.0kb upstream 2.0kb upstream 7943 true Chr01: 19456739-19464681 Physcomitrium patens
Pp3c1_26960 2.0kb upstream 2.0kb upstream 2000 false Chr01: 19456739-19458738 Physcomitrium patens
Pp3c1_26960 2.0kb downstream 2.0kb downstream 7943 true Chr01: 19458739-19466681 Physcomitrium patens
Pp3c1_26960 2.0kb downstream 2.0kb downstream 2000 false Chr01: 19464682-19466681 Physcomitrium patens
Pp3c1_26960 5.0kb upstream 5.0kb upstream 10943 true Chr01: 19453739-19464681 Physcomitrium patens
Pp3c1_26960 5.0kb upstream 5.0kb upstream 5000 false Chr01: 19453739-19458738 Physcomitrium patens
Pp3c1_26960 5.0kb downstream 5.0kb downstream 10943 true Chr01: 19458739-19469681 Physcomitrium patens
Pp3c1_26960 5.0kb downstream 5.0kb downstream 5000 false Chr01: 19464682-19469681 Physcomitrium patens
Pp3c1_26960 10.0kb upstream 10.0kb upstream 15943 true Chr01: 19448739-19464681 Physcomitrium patens
Pp3c1_26960 10.0kb upstream 10.0kb upstream 10000 false Chr01: 19448739-19458738 Physcomitrium patens
Pp3c1_26960 10.0kb downstream 10.0kb downstream 15943 true Chr01: 19458739-19474681 Physcomitrium patens
Pp3c1_26960 10.0kb downstream 10.0kb downstream 10000 false Chr01: 19464682-19474681 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121336535 5274 Embryophyte View MSA
123373358 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.822        
cufflinks 0.012     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low Low
cufflinks 0.085        
cufflinks 2.888       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low Low
cufflinks 0.053     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.823        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.085        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.863        
cufflinks 0.031     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.68        
cufflinks 0.286        
cufflinks 0.017     Low  
cufflinks 1.661       High
cufflinks 0.982       High

0 Strain