Gene : Pp3c1_4240 P. patens v3.3
Defline:  (1 of 4) 2.7.1.68 - 1-phosphatidylinositol-4-phosphate 5-kinase / Type I PIP kinase Genomic Order:  190
Name:  ? Pp3c1_4240 Secondary Identifier:  ? PAC:32971260
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ppatens PWY-6351 Physcomitrium patens pathologic  
Ppatens PWY-6352 Physcomitrium patens pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c1_4240 0.5kb upstream 0.5kb upstream 3429 true Chr01: 3158826-3162254 Physcomitrium patens
Pp3c1_4240 0.5kb upstream 0.5kb upstream 500 false Chr01: 3158826-3159325 Physcomitrium patens
Pp3c1_4240 0.5kb downstream 0.5kb downstream 3429 true Chr01: 3159326-3162754 Physcomitrium patens
Pp3c1_4240 0.5kb downstream 0.5kb downstream 500 false Chr01: 3162255-3162754 Physcomitrium patens
Pp3c1_4240 1.0kb upstream 1.0kb upstream 3929 true Chr01: 3158326-3162254 Physcomitrium patens
Pp3c1_4240 1.0kb upstream 1.0kb upstream 1000 false Chr01: 3158326-3159325 Physcomitrium patens
Pp3c1_4240 1.0kb downstream 1.0kb downstream 3929 true Chr01: 3159326-3163254 Physcomitrium patens
Pp3c1_4240 1.0kb downstream 1.0kb downstream 1000 false Chr01: 3162255-3163254 Physcomitrium patens
Pp3c1_4240 2.0kb upstream 2.0kb upstream 4929 true Chr01: 3157326-3162254 Physcomitrium patens
Pp3c1_4240 2.0kb upstream 2.0kb upstream 2000 false Chr01: 3157326-3159325 Physcomitrium patens
Pp3c1_4240 2.0kb downstream 2.0kb downstream 4929 true Chr01: 3159326-3164254 Physcomitrium patens
Pp3c1_4240 2.0kb downstream 2.0kb downstream 2000 false Chr01: 3162255-3164254 Physcomitrium patens
Pp3c1_4240 5.0kb upstream 5.0kb upstream 7929 true Chr01: 3154326-3162254 Physcomitrium patens
Pp3c1_4240 5.0kb upstream 5.0kb upstream 5000 false Chr01: 3154326-3159325 Physcomitrium patens
Pp3c1_4240 5.0kb downstream 5.0kb downstream 7929 true Chr01: 3159326-3167254 Physcomitrium patens
Pp3c1_4240 5.0kb downstream 5.0kb downstream 5000 false Chr01: 3162255-3167254 Physcomitrium patens
Pp3c1_4240 10.0kb upstream 10.0kb upstream 12929 true Chr01: 3149326-3162254 Physcomitrium patens
Pp3c1_4240 10.0kb upstream 10.0kb upstream 10000 false Chr01: 3149326-3159325 Physcomitrium patens
Pp3c1_4240 10.0kb downstream 10.0kb downstream 12929 true Chr01: 3159326-3172254 Physcomitrium patens
Pp3c1_4240 10.0kb downstream 10.0kb downstream 10000 false Chr01: 3162255-3172254 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121343051 5274 Embryophyte View MSA
123427397 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.046     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.111        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.077     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.086        
cufflinks 0.573       High
cufflinks 0.194        
cufflinks 0.014     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.034     Low  
cufflinks 0.02     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.068     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.033     Low  
cufflinks 0.215        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.331        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.265        
cufflinks 0.111        
cufflinks 0.025     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.044     Low  

0 Strain