Gene : Pp3c1_39580 P. patens v3.3
Defline:  (1 of 1) PTHR11528//PTHR11528:SF49 - HEAT SHOCK PROTEIN 90 Genomic Order:  1898
Name:  ? Pp3c1_39580 Secondary Identifier:  ? PAC:32969620
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c1_39580 0.5kb upstream 0.5kb upstream 1035 true Chr01: 27584113-27585147 Physcomitrium patens
Pp3c1_39580 0.5kb upstream 0.5kb upstream 500 false Chr01: 27584648-27585147 Physcomitrium patens
Pp3c1_39580 0.5kb downstream 0.5kb downstream 1035 true Chr01: 27583613-27584647 Physcomitrium patens
Pp3c1_39580 0.5kb downstream 0.5kb downstream 500 false Chr01: 27583613-27584112 Physcomitrium patens
Pp3c1_39580 1.0kb upstream 1.0kb upstream 1535 true Chr01: 27584113-27585647 Physcomitrium patens
Pp3c1_39580 1.0kb upstream 1.0kb upstream 1000 false Chr01: 27584648-27585647 Physcomitrium patens
Pp3c1_39580 1.0kb downstream 1.0kb downstream 1535 true Chr01: 27583113-27584647 Physcomitrium patens
Pp3c1_39580 1.0kb downstream 1.0kb downstream 1000 false Chr01: 27583113-27584112 Physcomitrium patens
Pp3c1_39580 2.0kb upstream 2.0kb upstream 2535 true Chr01: 27584113-27586647 Physcomitrium patens
Pp3c1_39580 2.0kb upstream 2.0kb upstream 2000 false Chr01: 27584648-27586647 Physcomitrium patens
Pp3c1_39580 2.0kb downstream 2.0kb downstream 2535 true Chr01: 27582113-27584647 Physcomitrium patens
Pp3c1_39580 2.0kb downstream 2.0kb downstream 2000 false Chr01: 27582113-27584112 Physcomitrium patens
Pp3c1_39580 5.0kb upstream 5.0kb upstream 5535 true Chr01: 27584113-27589647 Physcomitrium patens
Pp3c1_39580 5.0kb upstream 5.0kb upstream 5000 false Chr01: 27584648-27589647 Physcomitrium patens
Pp3c1_39580 5.0kb downstream 5.0kb downstream 5535 true Chr01: 27579113-27584647 Physcomitrium patens
Pp3c1_39580 5.0kb downstream 5.0kb downstream 5000 false Chr01: 27579113-27584112 Physcomitrium patens
Pp3c1_39580 10.0kb upstream 10.0kb upstream 10535 true Chr01: 27584113-27594647 Physcomitrium patens
Pp3c1_39580 10.0kb upstream 10.0kb upstream 10000 false Chr01: 27584648-27594647 Physcomitrium patens
Pp3c1_39580 10.0kb downstream 10.0kb downstream 10535 true Chr01: 27574113-27584647 Physcomitrium patens
Pp3c1_39580 10.0kb downstream 10.0kb downstream 10000 false Chr01: 27574113-27584112 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121351482 5274 Embryophyte View MSA
123382182 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.209       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.171       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.201        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.135        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.11        
cufflinks 0.166        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain