Gene : Pp3c1_6540 P. patens v3.3
Genomic Order:  295 Name:  ? Pp3c1_6540
Secondary Identifier:  ? PAC:32971167
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c1_6540 0.5kb upstream 0.5kb upstream 659 true Chr01: 5050098-5050756 Physcomitrium patens
Pp3c1_6540 0.5kb upstream 0.5kb upstream 500 false Chr01: 5050098-5050597 Physcomitrium patens
Pp3c1_6540 0.5kb downstream 0.5kb downstream 659 true Chr01: 5050598-5051256 Physcomitrium patens
Pp3c1_6540 0.5kb downstream 0.5kb downstream 500 false Chr01: 5050757-5051256 Physcomitrium patens
Pp3c1_6540 1.0kb upstream 1.0kb upstream 1159 true Chr01: 5049598-5050756 Physcomitrium patens
Pp3c1_6540 1.0kb upstream 1.0kb upstream 1000 false Chr01: 5049598-5050597 Physcomitrium patens
Pp3c1_6540 1.0kb downstream 1.0kb downstream 1159 true Chr01: 5050598-5051756 Physcomitrium patens
Pp3c1_6540 1.0kb downstream 1.0kb downstream 1000 false Chr01: 5050757-5051756 Physcomitrium patens
Pp3c1_6540 2.0kb upstream 2.0kb upstream 2159 true Chr01: 5048598-5050756 Physcomitrium patens
Pp3c1_6540 2.0kb upstream 2.0kb upstream 2000 false Chr01: 5048598-5050597 Physcomitrium patens
Pp3c1_6540 2.0kb downstream 2.0kb downstream 2159 true Chr01: 5050598-5052756 Physcomitrium patens
Pp3c1_6540 2.0kb downstream 2.0kb downstream 2000 false Chr01: 5050757-5052756 Physcomitrium patens
Pp3c1_6540 5.0kb upstream 5.0kb upstream 5159 true Chr01: 5045598-5050756 Physcomitrium patens
Pp3c1_6540 5.0kb upstream 5.0kb upstream 5000 false Chr01: 5045598-5050597 Physcomitrium patens
Pp3c1_6540 5.0kb downstream 5.0kb downstream 5159 true Chr01: 5050598-5055756 Physcomitrium patens
Pp3c1_6540 5.0kb downstream 5.0kb downstream 5000 false Chr01: 5050757-5055756 Physcomitrium patens
Pp3c1_6540 10.0kb upstream 10.0kb upstream 10159 true Chr01: 5040598-5050756 Physcomitrium patens
Pp3c1_6540 10.0kb upstream 10.0kb upstream 10000 false Chr01: 5040598-5050597 Physcomitrium patens
Pp3c1_6540 10.0kb downstream 10.0kb downstream 10159 true Chr01: 5050598-5060756 Physcomitrium patens
Pp3c1_6540 10.0kb downstream 10.0kb downstream 10000 false Chr01: 5050757-5060756 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121350711 5274 Embryophyte View MSA
123381855 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain