Gene : Pp3c2_22470 P. patens v3.3
Defline:  (1 of 2) PTHR12970 - TUMOR NECROSIS FACTOR SUPERFAMILY, MEMBER 5-INDUCED PROTEIN 1 CLAST3 Genomic Order:  1138
Name:  ? Pp3c2_22470 Secondary Identifier:  ? PAC:32933892
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c2_22470 0.5kb upstream 0.5kb upstream 3858 true Chr02: 14866120-14869977 Physcomitrium patens
Pp3c2_22470 0.5kb upstream 0.5kb upstream 500 false Chr02: 14866120-14866619 Physcomitrium patens
Pp3c2_22470 0.5kb downstream 0.5kb downstream 3858 true Chr02: 14866620-14870477 Physcomitrium patens
Pp3c2_22470 0.5kb downstream 0.5kb downstream 500 false Chr02: 14869978-14870477 Physcomitrium patens
Pp3c2_22470 1.0kb upstream 1.0kb upstream 4358 true Chr02: 14865620-14869977 Physcomitrium patens
Pp3c2_22470 1.0kb upstream 1.0kb upstream 1000 false Chr02: 14865620-14866619 Physcomitrium patens
Pp3c2_22470 1.0kb downstream 1.0kb downstream 4358 true Chr02: 14866620-14870977 Physcomitrium patens
Pp3c2_22470 1.0kb downstream 1.0kb downstream 1000 false Chr02: 14869978-14870977 Physcomitrium patens
Pp3c2_22470 2.0kb upstream 2.0kb upstream 5358 true Chr02: 14864620-14869977 Physcomitrium patens
Pp3c2_22470 2.0kb upstream 2.0kb upstream 2000 false Chr02: 14864620-14866619 Physcomitrium patens
Pp3c2_22470 2.0kb downstream 2.0kb downstream 5358 true Chr02: 14866620-14871977 Physcomitrium patens
Pp3c2_22470 2.0kb downstream 2.0kb downstream 2000 false Chr02: 14869978-14871977 Physcomitrium patens
Pp3c2_22470 5.0kb upstream 5.0kb upstream 8358 true Chr02: 14861620-14869977 Physcomitrium patens
Pp3c2_22470 5.0kb upstream 5.0kb upstream 5000 false Chr02: 14861620-14866619 Physcomitrium patens
Pp3c2_22470 5.0kb downstream 5.0kb downstream 8358 true Chr02: 14866620-14874977 Physcomitrium patens
Pp3c2_22470 5.0kb downstream 5.0kb downstream 5000 false Chr02: 14869978-14874977 Physcomitrium patens
Pp3c2_22470 10.0kb upstream 10.0kb upstream 13358 true Chr02: 14856620-14869977 Physcomitrium patens
Pp3c2_22470 10.0kb upstream 10.0kb upstream 10000 false Chr02: 14856620-14866619 Physcomitrium patens
Pp3c2_22470 10.0kb downstream 10.0kb downstream 13358 true Chr02: 14866620-14879977 Physcomitrium patens
Pp3c2_22470 10.0kb downstream 10.0kb downstream 10000 false Chr02: 14869978-14879977 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121344362 5274 Embryophyte View MSA
123425402 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain