Gene : Pp3c2_22478 P. patens v3.3
Defline:  (1 of 2) PTHR12970 - TUMOR NECROSIS FACTOR SUPERFAMILY, MEMBER 5-INDUCED PROTEIN 1 CLAST3 Genomic Order:  1139
Name:  ? Pp3c2_22478 Secondary Identifier:  ? PAC:32937189
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c2_22478 0.5kb upstream 0.5kb upstream 3844 true Chr02: 14866133-14869976 Physcomitrium patens
Pp3c2_22478 0.5kb upstream 0.5kb upstream 500 false Chr02: 14866133-14866632 Physcomitrium patens
Pp3c2_22478 0.5kb downstream 0.5kb downstream 3844 true Chr02: 14866633-14870476 Physcomitrium patens
Pp3c2_22478 0.5kb downstream 0.5kb downstream 500 false Chr02: 14869977-14870476 Physcomitrium patens
Pp3c2_22478 1.0kb upstream 1.0kb upstream 4344 true Chr02: 14865633-14869976 Physcomitrium patens
Pp3c2_22478 1.0kb upstream 1.0kb upstream 1000 false Chr02: 14865633-14866632 Physcomitrium patens
Pp3c2_22478 1.0kb downstream 1.0kb downstream 4344 true Chr02: 14866633-14870976 Physcomitrium patens
Pp3c2_22478 1.0kb downstream 1.0kb downstream 1000 false Chr02: 14869977-14870976 Physcomitrium patens
Pp3c2_22478 2.0kb upstream 2.0kb upstream 5344 true Chr02: 14864633-14869976 Physcomitrium patens
Pp3c2_22478 2.0kb upstream 2.0kb upstream 2000 false Chr02: 14864633-14866632 Physcomitrium patens
Pp3c2_22478 2.0kb downstream 2.0kb downstream 5344 true Chr02: 14866633-14871976 Physcomitrium patens
Pp3c2_22478 2.0kb downstream 2.0kb downstream 2000 false Chr02: 14869977-14871976 Physcomitrium patens
Pp3c2_22478 5.0kb upstream 5.0kb upstream 8344 true Chr02: 14861633-14869976 Physcomitrium patens
Pp3c2_22478 5.0kb upstream 5.0kb upstream 5000 false Chr02: 14861633-14866632 Physcomitrium patens
Pp3c2_22478 5.0kb downstream 5.0kb downstream 8344 true Chr02: 14866633-14874976 Physcomitrium patens
Pp3c2_22478 5.0kb downstream 5.0kb downstream 5000 false Chr02: 14869977-14874976 Physcomitrium patens
Pp3c2_22478 10.0kb upstream 10.0kb upstream 13344 true Chr02: 14856633-14869976 Physcomitrium patens
Pp3c2_22478 10.0kb upstream 10.0kb upstream 10000 false Chr02: 14856633-14866632 Physcomitrium patens
Pp3c2_22478 10.0kb downstream 10.0kb downstream 13344 true Chr02: 14866633-14879976 Physcomitrium patens
Pp3c2_22478 10.0kb downstream 10.0kb downstream 10000 false Chr02: 14869977-14879976 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121344362 5274 Embryophyte View MSA
123425402 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain