Gene : Pp3c2_24180 P. patens v3.3
Defline:  (1 of 2) PTHR21666//PTHR21666:SF196 - PEPTIDASE-RELATED Genomic Order:  1207
Name:  ? Pp3c2_24180 Secondary Identifier:  ? PAC:32935704
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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10 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c2_24180 0.5kb upstream 0.5kb upstream 3550 true Chr02: 16232394-16235943 Physcomitrium patens
Pp3c2_24180 0.5kb upstream 0.5kb upstream 500 false Chr02: 16235444-16235943 Physcomitrium patens
Pp3c2_24180 0.5kb downstream 0.5kb downstream 3550 true Chr02: 16231894-16235443 Physcomitrium patens
Pp3c2_24180 0.5kb downstream 0.5kb downstream 500 false Chr02: 16231894-16232393 Physcomitrium patens
Pp3c2_24180 1.0kb upstream 1.0kb upstream 4050 true Chr02: 16232394-16236443 Physcomitrium patens
Pp3c2_24180 1.0kb upstream 1.0kb upstream 1000 false Chr02: 16235444-16236443 Physcomitrium patens
Pp3c2_24180 1.0kb downstream 1.0kb downstream 4050 true Chr02: 16231394-16235443 Physcomitrium patens
Pp3c2_24180 1.0kb downstream 1.0kb downstream 1000 false Chr02: 16231394-16232393 Physcomitrium patens
Pp3c2_24180 2.0kb upstream 2.0kb upstream 5050 true Chr02: 16232394-16237443 Physcomitrium patens
Pp3c2_24180 2.0kb upstream 2.0kb upstream 2000 false Chr02: 16235444-16237443 Physcomitrium patens
Pp3c2_24180 2.0kb downstream 2.0kb downstream 5050 true Chr02: 16230394-16235443 Physcomitrium patens
Pp3c2_24180 2.0kb downstream 2.0kb downstream 2000 false Chr02: 16230394-16232393 Physcomitrium patens
Pp3c2_24180 5.0kb upstream 5.0kb upstream 8050 true Chr02: 16232394-16240443 Physcomitrium patens
Pp3c2_24180 5.0kb upstream 5.0kb upstream 5000 false Chr02: 16235444-16240443 Physcomitrium patens
Pp3c2_24180 5.0kb downstream 5.0kb downstream 8050 true Chr02: 16227394-16235443 Physcomitrium patens
Pp3c2_24180 5.0kb downstream 5.0kb downstream 5000 false Chr02: 16227394-16232393 Physcomitrium patens
Pp3c2_24180 10.0kb upstream 10.0kb upstream 13050 true Chr02: 16232394-16245443 Physcomitrium patens
Pp3c2_24180 10.0kb upstream 10.0kb upstream 10000 false Chr02: 16235444-16245443 Physcomitrium patens
Pp3c2_24180 10.0kb downstream 10.0kb downstream 13050 true Chr02: 16222394-16235443 Physcomitrium patens
Pp3c2_24180 10.0kb downstream 10.0kb downstream 10000 false Chr02: 16222394-16232393 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121343585 5274 Embryophyte View MSA
123427168 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 159.056     High  
cufflinks 108.688     High  
cufflinks 124.662     High  
cufflinks 216.015     High  
cufflinks 160.278     High  
cufflinks 30.657     High Low
cufflinks 220.51     High  
cufflinks 123.683     High  
cufflinks 158.489     High  
cufflinks 167.361     High  
cufflinks 149.44     High  
cufflinks 201.822     High  
cufflinks 160.09     High  
cufflinks 207.168     High  
cufflinks 179.135     High  
cufflinks 137.605     High  
cufflinks 177.649     High  
cufflinks 155.071     High  
cufflinks 168.952     High  
cufflinks 201.677     High  
cufflinks 224.851     High  
cufflinks 168.072     High  
cufflinks 245.824     High High
cufflinks 127.021     High  
cufflinks 150.331     High  
cufflinks 160.519     High  
cufflinks 115.152     High  
cufflinks 193.957     High  
cufflinks 35.885     High Low
cufflinks 187.079     High  

0 Strain