Gene : Pp3c2_25130 P. patens v3.3
Defline:  (1 of 4) PTHR24031:SF306 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 11 Genomic Order:  1247
Name:  ? Pp3c2_25130 Secondary Identifier:  ? PAC:32936612
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c2_25130 0.5kb upstream 0.5kb upstream 5554 true Chr02: 16915245-16920798 Physcomitrium patens
Pp3c2_25130 0.5kb upstream 0.5kb upstream 500 false Chr02: 16915245-16915744 Physcomitrium patens
Pp3c2_25130 0.5kb downstream 0.5kb downstream 5554 true Chr02: 16915745-16921298 Physcomitrium patens
Pp3c2_25130 0.5kb downstream 0.5kb downstream 500 false Chr02: 16920799-16921298 Physcomitrium patens
Pp3c2_25130 1.0kb upstream 1.0kb upstream 6054 true Chr02: 16914745-16920798 Physcomitrium patens
Pp3c2_25130 1.0kb upstream 1.0kb upstream 1000 false Chr02: 16914745-16915744 Physcomitrium patens
Pp3c2_25130 1.0kb downstream 1.0kb downstream 6054 true Chr02: 16915745-16921798 Physcomitrium patens
Pp3c2_25130 1.0kb downstream 1.0kb downstream 1000 false Chr02: 16920799-16921798 Physcomitrium patens
Pp3c2_25130 2.0kb upstream 2.0kb upstream 7054 true Chr02: 16913745-16920798 Physcomitrium patens
Pp3c2_25130 2.0kb upstream 2.0kb upstream 2000 false Chr02: 16913745-16915744 Physcomitrium patens
Pp3c2_25130 2.0kb downstream 2.0kb downstream 7054 true Chr02: 16915745-16922798 Physcomitrium patens
Pp3c2_25130 2.0kb downstream 2.0kb downstream 2000 false Chr02: 16920799-16922798 Physcomitrium patens
Pp3c2_25130 5.0kb upstream 5.0kb upstream 10054 true Chr02: 16910745-16920798 Physcomitrium patens
Pp3c2_25130 5.0kb upstream 5.0kb upstream 5000 false Chr02: 16910745-16915744 Physcomitrium patens
Pp3c2_25130 5.0kb downstream 5.0kb downstream 10054 true Chr02: 16915745-16925798 Physcomitrium patens
Pp3c2_25130 5.0kb downstream 5.0kb downstream 5000 false Chr02: 16920799-16925798 Physcomitrium patens
Pp3c2_25130 10.0kb upstream 10.0kb upstream 15054 true Chr02: 16905745-16920798 Physcomitrium patens
Pp3c2_25130 10.0kb upstream 10.0kb upstream 10000 false Chr02: 16905745-16915744 Physcomitrium patens
Pp3c2_25130 10.0kb downstream 10.0kb downstream 15054 true Chr02: 16915745-16930798 Physcomitrium patens
Pp3c2_25130 10.0kb downstream 10.0kb downstream 10000 false Chr02: 16920799-16930798 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121348302 5274 Embryophyte View MSA
123425824 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low High
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.011     Low High
cufflinks 0.002     Low  
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low High
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain