Gene : Pp3c2_33000 P. patens v3.3
Defline:  (1 of 2) PTHR11566:SF78 - DYNAMIN-LIKE PROTEIN ARC5 Genomic Order:  1650
Name:  ? Pp3c2_33000 Secondary Identifier:  ? PAC:32932807
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c2_33000 0.5kb upstream 0.5kb upstream 10479 true Chr02: 21854078-21864556 Physcomitrium patens
Pp3c2_33000 0.5kb upstream 0.5kb upstream 500 false Chr02: 21864057-21864556 Physcomitrium patens
Pp3c2_33000 0.5kb downstream 0.5kb downstream 10479 true Chr02: 21853578-21864056 Physcomitrium patens
Pp3c2_33000 0.5kb downstream 0.5kb downstream 500 false Chr02: 21853578-21854077 Physcomitrium patens
Pp3c2_33000 1.0kb upstream 1.0kb upstream 10979 true Chr02: 21854078-21865056 Physcomitrium patens
Pp3c2_33000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 21864057-21865056 Physcomitrium patens
Pp3c2_33000 1.0kb downstream 1.0kb downstream 10979 true Chr02: 21853078-21864056 Physcomitrium patens
Pp3c2_33000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 21853078-21854077 Physcomitrium patens
Pp3c2_33000 2.0kb upstream 2.0kb upstream 11979 true Chr02: 21854078-21866056 Physcomitrium patens
Pp3c2_33000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 21864057-21866056 Physcomitrium patens
Pp3c2_33000 2.0kb downstream 2.0kb downstream 11979 true Chr02: 21852078-21864056 Physcomitrium patens
Pp3c2_33000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 21852078-21854077 Physcomitrium patens
Pp3c2_33000 5.0kb upstream 5.0kb upstream 14979 true Chr02: 21854078-21869056 Physcomitrium patens
Pp3c2_33000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 21864057-21869056 Physcomitrium patens
Pp3c2_33000 5.0kb downstream 5.0kb downstream 14979 true Chr02: 21849078-21864056 Physcomitrium patens
Pp3c2_33000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 21849078-21854077 Physcomitrium patens
Pp3c2_33000 10.0kb upstream 10.0kb upstream 19979 true Chr02: 21854078-21874056 Physcomitrium patens
Pp3c2_33000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 21864057-21874056 Physcomitrium patens
Pp3c2_33000 10.0kb downstream 10.0kb downstream 19979 true Chr02: 21844078-21864056 Physcomitrium patens
Pp3c2_33000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 21844078-21854077 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121351086 5274 Embryophyte View MSA
123424369 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.292        
cufflinks 0.5       High
cufflinks 0.234       Low
cufflinks 0.373        
cufflinks 0.324        
cufflinks 0.252       Low
cufflinks 0.403        
cufflinks 0.372        
cufflinks 0.267       Low
cufflinks 0.273        
cufflinks 0.46       High
cufflinks 0.364        
cufflinks 0.397        
cufflinks 0.428       High
cufflinks 0.359        
cufflinks 0.289        
cufflinks 0.247       Low
cufflinks 0.474       High
cufflinks 0.233       Low
cufflinks 0.414        
cufflinks 0.245       Low
cufflinks 0.345        
cufflinks 0.28        
cufflinks 0.449       High
cufflinks 0.46       High
cufflinks 0.403        
cufflinks 0.325        
cufflinks 0.305        
cufflinks 0.326        
cufflinks 0.26       Low

0 Strain