Gene : Pp3c2_4020 P. patens v3.3
Genomic Order:  214 Name:  ? Pp3c2_4020
Secondary Identifier:  ? PAC:32934373
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c2_4020 0.5kb upstream 0.5kb upstream 3803 true Chr02: 2498722-2502524 Physcomitrium patens
Pp3c2_4020 0.5kb upstream 0.5kb upstream 500 false Chr02: 2502025-2502524 Physcomitrium patens
Pp3c2_4020 0.5kb downstream 0.5kb downstream 3803 true Chr02: 2498222-2502024 Physcomitrium patens
Pp3c2_4020 0.5kb downstream 0.5kb downstream 500 false Chr02: 2498222-2498721 Physcomitrium patens
Pp3c2_4020 1.0kb upstream 1.0kb upstream 4303 true Chr02: 2498722-2503024 Physcomitrium patens
Pp3c2_4020 1.0kb upstream 1.0kb upstream 1000 false Chr02: 2502025-2503024 Physcomitrium patens
Pp3c2_4020 1.0kb downstream 1.0kb downstream 4303 true Chr02: 2497722-2502024 Physcomitrium patens
Pp3c2_4020 1.0kb downstream 1.0kb downstream 1000 false Chr02: 2497722-2498721 Physcomitrium patens
Pp3c2_4020 2.0kb upstream 2.0kb upstream 5303 true Chr02: 2498722-2504024 Physcomitrium patens
Pp3c2_4020 2.0kb upstream 2.0kb upstream 2000 false Chr02: 2502025-2504024 Physcomitrium patens
Pp3c2_4020 2.0kb downstream 2.0kb downstream 5303 true Chr02: 2496722-2502024 Physcomitrium patens
Pp3c2_4020 2.0kb downstream 2.0kb downstream 2000 false Chr02: 2496722-2498721 Physcomitrium patens
Pp3c2_4020 5.0kb upstream 5.0kb upstream 8303 true Chr02: 2498722-2507024 Physcomitrium patens
Pp3c2_4020 5.0kb upstream 5.0kb upstream 5000 false Chr02: 2502025-2507024 Physcomitrium patens
Pp3c2_4020 5.0kb downstream 5.0kb downstream 8303 true Chr02: 2493722-2502024 Physcomitrium patens
Pp3c2_4020 5.0kb downstream 5.0kb downstream 5000 false Chr02: 2493722-2498721 Physcomitrium patens
Pp3c2_4020 10.0kb upstream 10.0kb upstream 13303 true Chr02: 2498722-2512024 Physcomitrium patens
Pp3c2_4020 10.0kb upstream 10.0kb upstream 10000 false Chr02: 2502025-2512024 Physcomitrium patens
Pp3c2_4020 10.0kb downstream 10.0kb downstream 13303 true Chr02: 2488722-2502024 Physcomitrium patens
Pp3c2_4020 10.0kb downstream 10.0kb downstream 10000 false Chr02: 2488722-2498721 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121329435 5274 Embryophyte Singleton cluster - no MSA
123366424 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.001     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain