Gene : Pp3c3_13280 P. patens v3.3
Defline:  (1 of 1) PTHR10657//PTHR10657:SF12 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE Genomic Order:  601
Name:  ? Pp3c3_13280 Secondary Identifier:  ? PAC:32943175
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c3_13280 0.5kb upstream 0.5kb upstream 5260 true Chr03: 9438270-9443529 Physcomitrium patens
Pp3c3_13280 0.5kb upstream 0.5kb upstream 500 false Chr03: 9443030-9443529 Physcomitrium patens
Pp3c3_13280 0.5kb downstream 0.5kb downstream 5260 true Chr03: 9437770-9443029 Physcomitrium patens
Pp3c3_13280 0.5kb downstream 0.5kb downstream 500 false Chr03: 9437770-9438269 Physcomitrium patens
Pp3c3_13280 1.0kb upstream 1.0kb upstream 5760 true Chr03: 9438270-9444029 Physcomitrium patens
Pp3c3_13280 1.0kb upstream 1.0kb upstream 1000 false Chr03: 9443030-9444029 Physcomitrium patens
Pp3c3_13280 1.0kb downstream 1.0kb downstream 5760 true Chr03: 9437270-9443029 Physcomitrium patens
Pp3c3_13280 1.0kb downstream 1.0kb downstream 1000 false Chr03: 9437270-9438269 Physcomitrium patens
Pp3c3_13280 2.0kb upstream 2.0kb upstream 6760 true Chr03: 9438270-9445029 Physcomitrium patens
Pp3c3_13280 2.0kb upstream 2.0kb upstream 2000 false Chr03: 9443030-9445029 Physcomitrium patens
Pp3c3_13280 2.0kb downstream 2.0kb downstream 6760 true Chr03: 9436270-9443029 Physcomitrium patens
Pp3c3_13280 2.0kb downstream 2.0kb downstream 2000 false Chr03: 9436270-9438269 Physcomitrium patens
Pp3c3_13280 5.0kb upstream 5.0kb upstream 9760 true Chr03: 9438270-9448029 Physcomitrium patens
Pp3c3_13280 5.0kb upstream 5.0kb upstream 5000 false Chr03: 9443030-9448029 Physcomitrium patens
Pp3c3_13280 5.0kb downstream 5.0kb downstream 9760 true Chr03: 9433270-9443029 Physcomitrium patens
Pp3c3_13280 5.0kb downstream 5.0kb downstream 5000 false Chr03: 9433270-9438269 Physcomitrium patens
Pp3c3_13280 10.0kb upstream 10.0kb upstream 14760 true Chr03: 9438270-9453029 Physcomitrium patens
Pp3c3_13280 10.0kb upstream 10.0kb upstream 10000 false Chr03: 9443030-9453029 Physcomitrium patens
Pp3c3_13280 10.0kb downstream 10.0kb downstream 14760 true Chr03: 9428270-9443029 Physcomitrium patens
Pp3c3_13280 10.0kb downstream 10.0kb downstream 10000 false Chr03: 9428270-9438269 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123429014 5275 Viridiplantae View MSA
121344744 5274 Embryophyte View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.77        
cufflinks 5.398        
cufflinks 3.739        
cufflinks 3.608        
cufflinks 6.956       High
cufflinks 2.974        
cufflinks 3.031        
cufflinks 4.842        
cufflinks 4.583        
cufflinks 3.395        
cufflinks 5.935        
cufflinks 3.534        
cufflinks 5.604        
cufflinks 3.231        
cufflinks 0.57       Low
cufflinks 3.959        
cufflinks 5.612        
cufflinks 3.714        
cufflinks 1.891        
cufflinks 3.541        
cufflinks 4.092        
cufflinks 0.558       Low
cufflinks 3.381        
cufflinks 4.324        
cufflinks 4.943        
cufflinks 1.207       Low
cufflinks 4.002        
cufflinks 1.525       Low
cufflinks 3.567        
cufflinks 3.938        

0 Strain