Gene : Pp3c3_22020 P. patens v3.3
Defline:  (1 of 2) PTHR11119//PTHR11119:SF36 - XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER Genomic Order:  1017
Name:  ? Pp3c3_22020 Secondary Identifier:  ? PAC:32944852
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

10 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c3_22020 0.5kb upstream 0.5kb upstream 4381 true Chr03: 15089998-15094378 Physcomitrium patens
Pp3c3_22020 0.5kb upstream 0.5kb upstream 500 false Chr03: 15089998-15090497 Physcomitrium patens
Pp3c3_22020 0.5kb downstream 0.5kb downstream 4381 true Chr03: 15090498-15094878 Physcomitrium patens
Pp3c3_22020 0.5kb downstream 0.5kb downstream 500 false Chr03: 15094379-15094878 Physcomitrium patens
Pp3c3_22020 1.0kb upstream 1.0kb upstream 4881 true Chr03: 15089498-15094378 Physcomitrium patens
Pp3c3_22020 1.0kb upstream 1.0kb upstream 1000 false Chr03: 15089498-15090497 Physcomitrium patens
Pp3c3_22020 1.0kb downstream 1.0kb downstream 4881 true Chr03: 15090498-15095378 Physcomitrium patens
Pp3c3_22020 1.0kb downstream 1.0kb downstream 1000 false Chr03: 15094379-15095378 Physcomitrium patens
Pp3c3_22020 2.0kb upstream 2.0kb upstream 5881 true Chr03: 15088498-15094378 Physcomitrium patens
Pp3c3_22020 2.0kb upstream 2.0kb upstream 2000 false Chr03: 15088498-15090497 Physcomitrium patens
Pp3c3_22020 2.0kb downstream 2.0kb downstream 5881 true Chr03: 15090498-15096378 Physcomitrium patens
Pp3c3_22020 2.0kb downstream 2.0kb downstream 2000 false Chr03: 15094379-15096378 Physcomitrium patens
Pp3c3_22020 5.0kb upstream 5.0kb upstream 8881 true Chr03: 15085498-15094378 Physcomitrium patens
Pp3c3_22020 5.0kb upstream 5.0kb upstream 5000 false Chr03: 15085498-15090497 Physcomitrium patens
Pp3c3_22020 5.0kb downstream 5.0kb downstream 8881 true Chr03: 15090498-15099378 Physcomitrium patens
Pp3c3_22020 5.0kb downstream 5.0kb downstream 5000 false Chr03: 15094379-15099378 Physcomitrium patens
Pp3c3_22020 10.0kb upstream 10.0kb upstream 13881 true Chr03: 15080498-15094378 Physcomitrium patens
Pp3c3_22020 10.0kb upstream 10.0kb upstream 10000 false Chr03: 15080498-15090497 Physcomitrium patens
Pp3c3_22020 10.0kb downstream 10.0kb downstream 13881 true Chr03: 15090498-15104378 Physcomitrium patens
Pp3c3_22020 10.0kb downstream 10.0kb downstream 10000 false Chr03: 15094379-15104378 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121342975 5274 Embryophyte View MSA
123428829 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.267        
cufflinks 1.328       High
cufflinks 1.539       High
cufflinks 0.148        
cufflinks 0.601        
cufflinks 1.256       High
cufflinks 0.127        
cufflinks 1.034       High
cufflinks 0.015     Low Low
cufflinks 0.346        
cufflinks 0.675        
cufflinks 0.691        
cufflinks 0.551        
cufflinks 0.046     Low Low
cufflinks 0.036     Low Low
cufflinks 0.051     Low Low
cufflinks 0.12        
cufflinks 0.277        
cufflinks 0.078     Low Low
cufflinks 0.02     Low Low
cufflinks 0.436        
cufflinks 0.276        
cufflinks 0.186        
cufflinks 0.885        
cufflinks 0.632        
cufflinks 0.252        
cufflinks 0.658        
cufflinks 0.306        
cufflinks 0.523        
cufflinks 0.844        

0 Strain