Gene : Pp3c3_30640 P. patens v3.3
Defline:  (1 of 1) PTHR21321:SF4 - EXOSOME COMPLEX COMPONENT RRP4 Genomic Order:  1427
Name:  ? Pp3c3_30640 Secondary Identifier:  ? PAC:32940563
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c3_30640 0.5kb upstream 0.5kb upstream 3624 true Chr03: 20923772-20927395 Physcomitrium patens
Pp3c3_30640 0.5kb upstream 0.5kb upstream 500 false Chr03: 20923772-20924271 Physcomitrium patens
Pp3c3_30640 0.5kb downstream 0.5kb downstream 3624 true Chr03: 20924272-20927895 Physcomitrium patens
Pp3c3_30640 0.5kb downstream 0.5kb downstream 500 false Chr03: 20927396-20927895 Physcomitrium patens
Pp3c3_30640 1.0kb upstream 1.0kb upstream 4124 true Chr03: 20923272-20927395 Physcomitrium patens
Pp3c3_30640 1.0kb upstream 1.0kb upstream 1000 false Chr03: 20923272-20924271 Physcomitrium patens
Pp3c3_30640 1.0kb downstream 1.0kb downstream 4124 true Chr03: 20924272-20928395 Physcomitrium patens
Pp3c3_30640 1.0kb downstream 1.0kb downstream 1000 false Chr03: 20927396-20928395 Physcomitrium patens
Pp3c3_30640 2.0kb upstream 2.0kb upstream 5124 true Chr03: 20922272-20927395 Physcomitrium patens
Pp3c3_30640 2.0kb upstream 2.0kb upstream 2000 false Chr03: 20922272-20924271 Physcomitrium patens
Pp3c3_30640 2.0kb downstream 2.0kb downstream 5124 true Chr03: 20924272-20929395 Physcomitrium patens
Pp3c3_30640 2.0kb downstream 2.0kb downstream 2000 false Chr03: 20927396-20929395 Physcomitrium patens
Pp3c3_30640 5.0kb upstream 5.0kb upstream 8124 true Chr03: 20919272-20927395 Physcomitrium patens
Pp3c3_30640 5.0kb upstream 5.0kb upstream 5000 false Chr03: 20919272-20924271 Physcomitrium patens
Pp3c3_30640 5.0kb downstream 5.0kb downstream 8124 true Chr03: 20924272-20932395 Physcomitrium patens
Pp3c3_30640 5.0kb downstream 5.0kb downstream 5000 false Chr03: 20927396-20932395 Physcomitrium patens
Pp3c3_30640 10.0kb upstream 10.0kb upstream 13124 true Chr03: 20914272-20927395 Physcomitrium patens
Pp3c3_30640 10.0kb upstream 10.0kb upstream 10000 false Chr03: 20914272-20924271 Physcomitrium patens
Pp3c3_30640 10.0kb downstream 10.0kb downstream 13124 true Chr03: 20924272-20937395 Physcomitrium patens
Pp3c3_30640 10.0kb downstream 10.0kb downstream 10000 false Chr03: 20927396-20937395 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121344943 5274 Embryophyte View MSA
123428223 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.178        
cufflinks 1.754        
cufflinks 2.776       High
cufflinks 2.39        
cufflinks 1.547        
cufflinks 1.053       Low
cufflinks 2.263        
cufflinks 1.01       Low
cufflinks 2.192        
cufflinks 2.274        
cufflinks 2.407        
cufflinks 2.372        
cufflinks 2.786       High
cufflinks 2.266        
cufflinks 2.001        
cufflinks 1.723        
cufflinks 1.037       Low
cufflinks 1.568        
cufflinks 1.139       Low
cufflinks 2.734       High
cufflinks 1.952        
cufflinks 1.181       Low
cufflinks 1.709        
cufflinks 2.895       High
cufflinks 1.19       Low
cufflinks 1.918        
cufflinks 2.333        
cufflinks 1.578        
cufflinks 1.691        
cufflinks 1.659        

0 Strain