Gene : Pp3c3_37390 P. patens v3.3
Defline:  (1 of 2) PTHR10796:SF117 - PATCHED FAMILY PROTEIN Genomic Order:  1766
Name:  ? Pp3c3_37390 Secondary Identifier:  ? PAC:32940808
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c3_37390 0.5kb upstream 0.5kb upstream 14460 true Chr03: 25033335-25047794 Physcomitrium patens
Pp3c3_37390 0.5kb upstream 0.5kb upstream 500 false Chr03: 25047295-25047794 Physcomitrium patens
Pp3c3_37390 0.5kb downstream 0.5kb downstream 14460 true Chr03: 25032835-25047294 Physcomitrium patens
Pp3c3_37390 0.5kb downstream 0.5kb downstream 500 false Chr03: 25032835-25033334 Physcomitrium patens
Pp3c3_37390 1.0kb upstream 1.0kb upstream 14960 true Chr03: 25033335-25048294 Physcomitrium patens
Pp3c3_37390 1.0kb upstream 1.0kb upstream 1000 false Chr03: 25047295-25048294 Physcomitrium patens
Pp3c3_37390 1.0kb downstream 1.0kb downstream 14960 true Chr03: 25032335-25047294 Physcomitrium patens
Pp3c3_37390 1.0kb downstream 1.0kb downstream 1000 false Chr03: 25032335-25033334 Physcomitrium patens
Pp3c3_37390 2.0kb upstream 2.0kb upstream 15960 true Chr03: 25033335-25049294 Physcomitrium patens
Pp3c3_37390 2.0kb upstream 2.0kb upstream 2000 false Chr03: 25047295-25049294 Physcomitrium patens
Pp3c3_37390 2.0kb downstream 2.0kb downstream 15960 true Chr03: 25031335-25047294 Physcomitrium patens
Pp3c3_37390 2.0kb downstream 2.0kb downstream 2000 false Chr03: 25031335-25033334 Physcomitrium patens
Pp3c3_37390 5.0kb upstream 5.0kb upstream 18960 true Chr03: 25033335-25052294 Physcomitrium patens
Pp3c3_37390 5.0kb upstream 5.0kb upstream 5000 false Chr03: 25047295-25052294 Physcomitrium patens
Pp3c3_37390 5.0kb downstream 5.0kb downstream 18960 true Chr03: 25028335-25047294 Physcomitrium patens
Pp3c3_37390 5.0kb downstream 5.0kb downstream 5000 false Chr03: 25028335-25033334 Physcomitrium patens
Pp3c3_37390 10.0kb upstream 10.0kb upstream 23960 true Chr03: 25033335-25057294 Physcomitrium patens
Pp3c3_37390 10.0kb upstream 10.0kb upstream 10000 false Chr03: 25047295-25057294 Physcomitrium patens
Pp3c3_37390 10.0kb downstream 10.0kb downstream 23960 true Chr03: 25023335-25047294 Physcomitrium patens
Pp3c3_37390 10.0kb downstream 10.0kb downstream 10000 false Chr03: 25023335-25033334 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123429105 5275 Viridiplantae View MSA
121349896 5274 Embryophyte View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.924        
cufflinks 0.686        
cufflinks 0.872        
cufflinks 1.047        
cufflinks 1.455       High
cufflinks 2.611       High
cufflinks 0.61       Low
cufflinks 0.662        
cufflinks 1.422       High
cufflinks 0.655        
cufflinks 2.395       High
cufflinks 0.874        
cufflinks 0.636        
cufflinks 0.816        
cufflinks 1.456       High
cufflinks 1.239        
cufflinks 1.062        
cufflinks 0.663        
cufflinks 0.721        
cufflinks 0.561       Low
cufflinks 0.55       Low
cufflinks 0.714        
cufflinks 0.549       Low
cufflinks 0.678        
cufflinks 0.889        
cufflinks 1.294        
cufflinks 0.993        
cufflinks 1.082        
cufflinks 0.929        
cufflinks 0.739        

0 Strain