Gene : Pp3c4_15230 P. patens v3.3
Defline:  (1 of 1) KOG2257 - N-acetylglucosaminyltransferase complex, subunit PIG-P, required for phosphatidylinositol biosynthesis Genomic Order:  709
Name:  ? Pp3c4_15230 Secondary Identifier:  ? PAC:32922708
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c4_15230 0.5kb upstream 0.5kb upstream 2278 true Chr04: 10645859-10648136 Physcomitrium patens
Pp3c4_15230 0.5kb upstream 0.5kb upstream 500 false Chr04: 10645859-10646358 Physcomitrium patens
Pp3c4_15230 0.5kb downstream 0.5kb downstream 2278 true Chr04: 10646359-10648636 Physcomitrium patens
Pp3c4_15230 0.5kb downstream 0.5kb downstream 500 false Chr04: 10648137-10648636 Physcomitrium patens
Pp3c4_15230 1.0kb upstream 1.0kb upstream 2778 true Chr04: 10645359-10648136 Physcomitrium patens
Pp3c4_15230 1.0kb upstream 1.0kb upstream 1000 false Chr04: 10645359-10646358 Physcomitrium patens
Pp3c4_15230 1.0kb downstream 1.0kb downstream 2778 true Chr04: 10646359-10649136 Physcomitrium patens
Pp3c4_15230 1.0kb downstream 1.0kb downstream 1000 false Chr04: 10648137-10649136 Physcomitrium patens
Pp3c4_15230 2.0kb upstream 2.0kb upstream 3778 true Chr04: 10644359-10648136 Physcomitrium patens
Pp3c4_15230 2.0kb upstream 2.0kb upstream 2000 false Chr04: 10644359-10646358 Physcomitrium patens
Pp3c4_15230 2.0kb downstream 2.0kb downstream 3778 true Chr04: 10646359-10650136 Physcomitrium patens
Pp3c4_15230 2.0kb downstream 2.0kb downstream 2000 false Chr04: 10648137-10650136 Physcomitrium patens
Pp3c4_15230 5.0kb upstream 5.0kb upstream 6778 true Chr04: 10641359-10648136 Physcomitrium patens
Pp3c4_15230 5.0kb upstream 5.0kb upstream 5000 false Chr04: 10641359-10646358 Physcomitrium patens
Pp3c4_15230 5.0kb downstream 5.0kb downstream 6778 true Chr04: 10646359-10653136 Physcomitrium patens
Pp3c4_15230 5.0kb downstream 5.0kb downstream 5000 false Chr04: 10648137-10653136 Physcomitrium patens
Pp3c4_15230 10.0kb upstream 10.0kb upstream 11778 true Chr04: 10636359-10648136 Physcomitrium patens
Pp3c4_15230 10.0kb upstream 10.0kb upstream 10000 false Chr04: 10636359-10646358 Physcomitrium patens
Pp3c4_15230 10.0kb downstream 10.0kb downstream 11778 true Chr04: 10646359-10658136 Physcomitrium patens
Pp3c4_15230 10.0kb downstream 10.0kb downstream 10000 false Chr04: 10648137-10658136 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121344458 5274 Embryophyte View MSA
123428026 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.432        
cufflinks 3.637        
cufflinks 1.978       Low
cufflinks 2.636       Low
cufflinks 3.477        
cufflinks 2.55       Low
cufflinks 7.255        
cufflinks 4.118        
cufflinks 3.939        
cufflinks 3.453        
cufflinks 2.492       Low
cufflinks 16.127       High
cufflinks 4.797        
cufflinks 3.08        
cufflinks 6.841        
cufflinks 9.455       High
cufflinks 3.993        
cufflinks 4.327        
cufflinks 6.295        
cufflinks 6.604        
cufflinks 2.864        
cufflinks 3.633        
cufflinks 2.124       Low
cufflinks 3.809        
cufflinks 7.267        
cufflinks 16.67       High
cufflinks 3.725        
cufflinks 5.262        
cufflinks 5.677        
cufflinks 7.262        

0 Strain