Gene : Pp3c5_19514 P. patens v3.3
Defline:  (1 of 2) KOG0511 - Ankyrin repeat protein Genomic Order:  890
Name:  ? Pp3c5_19514 Secondary Identifier:  ? PAC:32954470
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c5_19514 0.5kb upstream 0.5kb upstream 5978 true Chr05: 13677313-13683290 Physcomitrium patens
Pp3c5_19514 0.5kb upstream 0.5kb upstream 500 false Chr05: 13677313-13677812 Physcomitrium patens
Pp3c5_19514 0.5kb downstream 0.5kb downstream 5978 true Chr05: 13677813-13683790 Physcomitrium patens
Pp3c5_19514 0.5kb downstream 0.5kb downstream 500 false Chr05: 13683291-13683790 Physcomitrium patens
Pp3c5_19514 1.0kb upstream 1.0kb upstream 6478 true Chr05: 13676813-13683290 Physcomitrium patens
Pp3c5_19514 1.0kb upstream 1.0kb upstream 1000 false Chr05: 13676813-13677812 Physcomitrium patens
Pp3c5_19514 1.0kb downstream 1.0kb downstream 6478 true Chr05: 13677813-13684290 Physcomitrium patens
Pp3c5_19514 1.0kb downstream 1.0kb downstream 1000 false Chr05: 13683291-13684290 Physcomitrium patens
Pp3c5_19514 2.0kb upstream 2.0kb upstream 7478 true Chr05: 13675813-13683290 Physcomitrium patens
Pp3c5_19514 2.0kb upstream 2.0kb upstream 2000 false Chr05: 13675813-13677812 Physcomitrium patens
Pp3c5_19514 2.0kb downstream 2.0kb downstream 7478 true Chr05: 13677813-13685290 Physcomitrium patens
Pp3c5_19514 2.0kb downstream 2.0kb downstream 2000 false Chr05: 13683291-13685290 Physcomitrium patens
Pp3c5_19514 5.0kb upstream 5.0kb upstream 10478 true Chr05: 13672813-13683290 Physcomitrium patens
Pp3c5_19514 5.0kb upstream 5.0kb upstream 5000 false Chr05: 13672813-13677812 Physcomitrium patens
Pp3c5_19514 5.0kb downstream 5.0kb downstream 10478 true Chr05: 13677813-13688290 Physcomitrium patens
Pp3c5_19514 5.0kb downstream 5.0kb downstream 5000 false Chr05: 13683291-13688290 Physcomitrium patens
Pp3c5_19514 10.0kb upstream 10.0kb upstream 15478 true Chr05: 13667813-13683290 Physcomitrium patens
Pp3c5_19514 10.0kb upstream 10.0kb upstream 10000 false Chr05: 13667813-13677812 Physcomitrium patens
Pp3c5_19514 10.0kb downstream 10.0kb downstream 15478 true Chr05: 13677813-13693290 Physcomitrium patens
Pp3c5_19514 10.0kb downstream 10.0kb downstream 10000 false Chr05: 13683291-13693290 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123429159 5275 Viridiplantae View MSA
121345806 5274 Embryophyte View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain