Gene : Pp3c5_19510 P. patens v3.3
Defline:  (1 of 2) KOG0511 - Ankyrin repeat protein Genomic Order:  889
Name:  ? Pp3c5_19510 Secondary Identifier:  ? PAC:32953814
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c5_19510 0.5kb upstream 0.5kb upstream 5653 true Chr05: 13677313-13682965 Physcomitrium patens
Pp3c5_19510 0.5kb upstream 0.5kb upstream 500 false Chr05: 13677313-13677812 Physcomitrium patens
Pp3c5_19510 0.5kb downstream 0.5kb downstream 5653 true Chr05: 13677813-13683465 Physcomitrium patens
Pp3c5_19510 0.5kb downstream 0.5kb downstream 500 false Chr05: 13682966-13683465 Physcomitrium patens
Pp3c5_19510 1.0kb upstream 1.0kb upstream 6153 true Chr05: 13676813-13682965 Physcomitrium patens
Pp3c5_19510 1.0kb upstream 1.0kb upstream 1000 false Chr05: 13676813-13677812 Physcomitrium patens
Pp3c5_19510 1.0kb downstream 1.0kb downstream 6153 true Chr05: 13677813-13683965 Physcomitrium patens
Pp3c5_19510 1.0kb downstream 1.0kb downstream 1000 false Chr05: 13682966-13683965 Physcomitrium patens
Pp3c5_19510 2.0kb upstream 2.0kb upstream 7153 true Chr05: 13675813-13682965 Physcomitrium patens
Pp3c5_19510 2.0kb upstream 2.0kb upstream 2000 false Chr05: 13675813-13677812 Physcomitrium patens
Pp3c5_19510 2.0kb downstream 2.0kb downstream 7153 true Chr05: 13677813-13684965 Physcomitrium patens
Pp3c5_19510 2.0kb downstream 2.0kb downstream 2000 false Chr05: 13682966-13684965 Physcomitrium patens
Pp3c5_19510 5.0kb upstream 5.0kb upstream 10153 true Chr05: 13672813-13682965 Physcomitrium patens
Pp3c5_19510 5.0kb upstream 5.0kb upstream 5000 false Chr05: 13672813-13677812 Physcomitrium patens
Pp3c5_19510 5.0kb downstream 5.0kb downstream 10153 true Chr05: 13677813-13687965 Physcomitrium patens
Pp3c5_19510 5.0kb downstream 5.0kb downstream 5000 false Chr05: 13682966-13687965 Physcomitrium patens
Pp3c5_19510 10.0kb upstream 10.0kb upstream 15153 true Chr05: 13667813-13682965 Physcomitrium patens
Pp3c5_19510 10.0kb upstream 10.0kb upstream 10000 false Chr05: 13667813-13677812 Physcomitrium patens
Pp3c5_19510 10.0kb downstream 10.0kb downstream 15153 true Chr05: 13677813-13692965 Physcomitrium patens
Pp3c5_19510 10.0kb downstream 10.0kb downstream 10000 false Chr05: 13682966-13692965 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123429159 5275 Viridiplantae View MSA
121345806 5274 Embryophyte View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain