Gene : Pp3c6_14060 P. patens v3.3
Genomic Order:  653 Name:  ? Pp3c6_14060
Secondary Identifier:  ? PAC:32976834
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c6_14060 0.5kb upstream 0.5kb upstream 2896   true Chr06: 8987903-8990798 Physcomitrium patens
Pp3c6_14060 0.5kb upstream 0.5kb upstream 500   false Chr06: 8987903-8988402 Physcomitrium patens
Pp3c6_14060 0.5kb downstream 0.5kb downstream 2896   true Chr06: 8988403-8991298 Physcomitrium patens
Pp3c6_14060 0.5kb downstream 0.5kb downstream 500   false Chr06: 8990799-8991298 Physcomitrium patens
Pp3c6_14060 1.0kb upstream 1.0kb upstream 3396   true Chr06: 8987403-8990798 Physcomitrium patens
Pp3c6_14060 1.0kb upstream 1.0kb upstream 1000   false Chr06: 8987403-8988402 Physcomitrium patens
Pp3c6_14060 1.0kb downstream 1.0kb downstream 3396   true Chr06: 8988403-8991798 Physcomitrium patens
Pp3c6_14060 1.0kb downstream 1.0kb downstream 1000   false Chr06: 8990799-8991798 Physcomitrium patens
Pp3c6_14060 2.0kb upstream 2.0kb upstream 4396   true Chr06: 8986403-8990798 Physcomitrium patens
Pp3c6_14060 2.0kb upstream 2.0kb upstream 2000   false Chr06: 8986403-8988402 Physcomitrium patens
Pp3c6_14060 2.0kb downstream 2.0kb downstream 4396   true Chr06: 8988403-8992798 Physcomitrium patens
Pp3c6_14060 2.0kb downstream 2.0kb downstream 2000   false Chr06: 8990799-8992798 Physcomitrium patens
Pp3c6_14060 5.0kb upstream 5.0kb upstream 7396   true Chr06: 8983403-8990798 Physcomitrium patens
Pp3c6_14060 5.0kb upstream 5.0kb upstream 5000   false Chr06: 8983403-8988402 Physcomitrium patens
Pp3c6_14060 5.0kb downstream 5.0kb downstream 7396   true Chr06: 8988403-8995798 Physcomitrium patens
Pp3c6_14060 5.0kb downstream 5.0kb downstream 5000   false Chr06: 8990799-8995798 Physcomitrium patens
Pp3c6_14060 10.0kb upstream 10.0kb upstream 12396   true Chr06: 8978403-8990798 Physcomitrium patens
Pp3c6_14060 10.0kb upstream 10.0kb upstream 10000   false Chr06: 8978403-8988402 Physcomitrium patens
Pp3c6_14060 10.0kb downstream 10.0kb downstream 12396   true Chr06: 8988403-9000798 Physcomitrium patens
Pp3c6_14060 10.0kb downstream 10.0kb downstream 10000   false Chr06: 8990799-9000798 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121342982 5274 Embryophyte View MSA
123379356 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.029     Low  
cufflinks 0.17        
cufflinks 0.092        
cufflinks 0.053     Low  
cufflinks 0.039     Low  
cufflinks 0.37       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  
cufflinks 0.011     Low Low
cufflinks 0.162        
cufflinks 0.011     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.06     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low Low
cufflinks 0.369       High
cufflinks 0.013     Low  
cufflinks 0.14        
cufflinks 0.034     Low  
cufflinks 0.02     Low  
cufflinks 0.011     Low Low
cufflinks 0.607       High
cufflinks 0.584       High
cufflinks 0.185        
cufflinks 0.04     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low Low
cufflinks 0.052     Low  

0 Strain