Gene : Pp3c6_9550 P. patens v3.3
Defline:  (1 of 1) PF02080//PF03600 - TrkA-C domain (TrkA_C) // Citrate transporter (CitMHS) Genomic Order:  457
Name:  ? Pp3c6_9550 Secondary Identifier:  ? PAC:32978604
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c6_9550 0.5kb upstream 0.5kb upstream 5097   true Chr06: 5996985-6002081 Physcomitrium patens
Pp3c6_9550 0.5kb upstream 0.5kb upstream 500   false Chr06: 5996985-5997484 Physcomitrium patens
Pp3c6_9550 0.5kb downstream 0.5kb downstream 5097   true Chr06: 5997485-6002581 Physcomitrium patens
Pp3c6_9550 0.5kb downstream 0.5kb downstream 500   false Chr06: 6002082-6002581 Physcomitrium patens
Pp3c6_9550 1.0kb upstream 1.0kb upstream 5597   true Chr06: 5996485-6002081 Physcomitrium patens
Pp3c6_9550 1.0kb upstream 1.0kb upstream 1000   false Chr06: 5996485-5997484 Physcomitrium patens
Pp3c6_9550 1.0kb downstream 1.0kb downstream 5597   true Chr06: 5997485-6003081 Physcomitrium patens
Pp3c6_9550 1.0kb downstream 1.0kb downstream 1000   false Chr06: 6002082-6003081 Physcomitrium patens
Pp3c6_9550 2.0kb upstream 2.0kb upstream 6597   true Chr06: 5995485-6002081 Physcomitrium patens
Pp3c6_9550 2.0kb upstream 2.0kb upstream 2000   false Chr06: 5995485-5997484 Physcomitrium patens
Pp3c6_9550 2.0kb downstream 2.0kb downstream 6597   true Chr06: 5997485-6004081 Physcomitrium patens
Pp3c6_9550 2.0kb downstream 2.0kb downstream 2000   false Chr06: 6002082-6004081 Physcomitrium patens
Pp3c6_9550 5.0kb upstream 5.0kb upstream 9597   true Chr06: 5992485-6002081 Physcomitrium patens
Pp3c6_9550 5.0kb upstream 5.0kb upstream 5000   false Chr06: 5992485-5997484 Physcomitrium patens
Pp3c6_9550 5.0kb downstream 5.0kb downstream 9597   true Chr06: 5997485-6007081 Physcomitrium patens
Pp3c6_9550 5.0kb downstream 5.0kb downstream 5000   false Chr06: 6002082-6007081 Physcomitrium patens
Pp3c6_9550 10.0kb upstream 10.0kb upstream 14597   true Chr06: 5987485-6002081 Physcomitrium patens
Pp3c6_9550 10.0kb upstream 10.0kb upstream 10000   false Chr06: 5987485-5997484 Physcomitrium patens
Pp3c6_9550 10.0kb downstream 10.0kb downstream 14597   true Chr06: 5997485-6012081 Physcomitrium patens
Pp3c6_9550 10.0kb downstream 10.0kb downstream 10000   false Chr06: 6002082-6012081 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121342806 5274 Embryophyte View MSA
123427329 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.034     Low  

0 Strain