Gene : Pp3c7_13410 P. patens v3.3
Defline:  (1 of 5) PTHR24073:SF509 - RAS-RELATED PROTEIN RAB-21 Genomic Order:  699
Name:  ? Pp3c7_13410 Secondary Identifier:  ? PAC:32923770
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c7_13410 0.5kb upstream 0.5kb upstream 2484 true Chr07: 9150785-9153268 Physcomitrium patens
Pp3c7_13410 0.5kb upstream 0.5kb upstream 500 false Chr07: 9150785-9151284 Physcomitrium patens
Pp3c7_13410 0.5kb downstream 0.5kb downstream 2484 true Chr07: 9151285-9153768 Physcomitrium patens
Pp3c7_13410 0.5kb downstream 0.5kb downstream 500 false Chr07: 9153269-9153768 Physcomitrium patens
Pp3c7_13410 1.0kb upstream 1.0kb upstream 2984 true Chr07: 9150285-9153268 Physcomitrium patens
Pp3c7_13410 1.0kb upstream 1.0kb upstream 1000 false Chr07: 9150285-9151284 Physcomitrium patens
Pp3c7_13410 1.0kb downstream 1.0kb downstream 2984 true Chr07: 9151285-9154268 Physcomitrium patens
Pp3c7_13410 1.0kb downstream 1.0kb downstream 1000 false Chr07: 9153269-9154268 Physcomitrium patens
Pp3c7_13410 2.0kb upstream 2.0kb upstream 3984 true Chr07: 9149285-9153268 Physcomitrium patens
Pp3c7_13410 2.0kb upstream 2.0kb upstream 2000 false Chr07: 9149285-9151284 Physcomitrium patens
Pp3c7_13410 2.0kb downstream 2.0kb downstream 3984 true Chr07: 9151285-9155268 Physcomitrium patens
Pp3c7_13410 2.0kb downstream 2.0kb downstream 2000 false Chr07: 9153269-9155268 Physcomitrium patens
Pp3c7_13410 5.0kb upstream 5.0kb upstream 6984 true Chr07: 9146285-9153268 Physcomitrium patens
Pp3c7_13410 5.0kb upstream 5.0kb upstream 5000 false Chr07: 9146285-9151284 Physcomitrium patens
Pp3c7_13410 5.0kb downstream 5.0kb downstream 6984 true Chr07: 9151285-9158268 Physcomitrium patens
Pp3c7_13410 5.0kb downstream 5.0kb downstream 5000 false Chr07: 9153269-9158268 Physcomitrium patens
Pp3c7_13410 10.0kb upstream 10.0kb upstream 11984 true Chr07: 9141285-9153268 Physcomitrium patens
Pp3c7_13410 10.0kb upstream 10.0kb upstream 10000 false Chr07: 9141285-9151284 Physcomitrium patens
Pp3c7_13410 10.0kb downstream 10.0kb downstream 11984 true Chr07: 9151285-9163268 Physcomitrium patens
Pp3c7_13410 10.0kb downstream 10.0kb downstream 10000 false Chr07: 9153269-9163268 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121350094 5274 Embryophyte View MSA
123426834 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.026     Low  
cufflinks 0.036     Low  
cufflinks 0.167       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low  
cufflinks 0.045     Low  
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.031     Low  
cufflinks 0.085     Low  
cufflinks 0.061     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.076     Low  
cufflinks 0.122       High
cufflinks 0.026     Low  
cufflinks 0.031     Low  
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.062     Low  
cufflinks 0.009     Low Low
cufflinks 0.044     Low  
cufflinks 0.097       High
cufflinks 0.021     Low  
cufflinks 0.075        
cufflinks 0.075     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.031     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.161       High

0 Strain