Gene : Pp3c7_2220 P. patens v3.3
Defline:  (1 of 9) PTHR21666 - PEPTIDASE-RELATED Genomic Order:  121
Name:  ? Pp3c7_2220 Secondary Identifier:  ? PAC:32922989
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c7_2220 0.5kb upstream 0.5kb upstream 3019 true Chr07: 1436856-1439874 Physcomitrium patens
Pp3c7_2220 0.5kb upstream 0.5kb upstream 500 false Chr07: 1439375-1439874 Physcomitrium patens
Pp3c7_2220 0.5kb downstream 0.5kb downstream 3019 true Chr07: 1436356-1439374 Physcomitrium patens
Pp3c7_2220 0.5kb downstream 0.5kb downstream 500 false Chr07: 1436356-1436855 Physcomitrium patens
Pp3c7_2220 1.0kb upstream 1.0kb upstream 3519 true Chr07: 1436856-1440374 Physcomitrium patens
Pp3c7_2220 1.0kb upstream 1.0kb upstream 1000 false Chr07: 1439375-1440374 Physcomitrium patens
Pp3c7_2220 1.0kb downstream 1.0kb downstream 3519 true Chr07: 1435856-1439374 Physcomitrium patens
Pp3c7_2220 1.0kb downstream 1.0kb downstream 1000 false Chr07: 1435856-1436855 Physcomitrium patens
Pp3c7_2220 2.0kb upstream 2.0kb upstream 4519 true Chr07: 1436856-1441374 Physcomitrium patens
Pp3c7_2220 2.0kb upstream 2.0kb upstream 2000 false Chr07: 1439375-1441374 Physcomitrium patens
Pp3c7_2220 2.0kb downstream 2.0kb downstream 4519 true Chr07: 1434856-1439374 Physcomitrium patens
Pp3c7_2220 2.0kb downstream 2.0kb downstream 2000 false Chr07: 1434856-1436855 Physcomitrium patens
Pp3c7_2220 5.0kb upstream 5.0kb upstream 7519 true Chr07: 1436856-1444374 Physcomitrium patens
Pp3c7_2220 5.0kb upstream 5.0kb upstream 5000 false Chr07: 1439375-1444374 Physcomitrium patens
Pp3c7_2220 5.0kb downstream 5.0kb downstream 7519 true Chr07: 1431856-1439374 Physcomitrium patens
Pp3c7_2220 5.0kb downstream 5.0kb downstream 5000 false Chr07: 1431856-1436855 Physcomitrium patens
Pp3c7_2220 10.0kb upstream 10.0kb upstream 12519 true Chr07: 1436856-1449374 Physcomitrium patens
Pp3c7_2220 10.0kb upstream 10.0kb upstream 10000 false Chr07: 1439375-1449374 Physcomitrium patens
Pp3c7_2220 10.0kb downstream 10.0kb downstream 12519 true Chr07: 1426856-1439374 Physcomitrium patens
Pp3c7_2220 10.0kb downstream 10.0kb downstream 10000 false Chr07: 1426856-1436855 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121343339 5274 Embryophyte View MSA
123379609 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.094        
cufflinks 3.361        
cufflinks 4.762       High
cufflinks 3.737        
cufflinks 3.481        
cufflinks 2.943        
cufflinks 0.52       Low
cufflinks 3.602        
cufflinks 3.661        
cufflinks 3.168        
cufflinks 3.323        
cufflinks 0.481       Low
cufflinks 3.637        
cufflinks 2.32        
cufflinks 2.352        
cufflinks 3.71        
cufflinks 3.165        
cufflinks 1.151       Low
cufflinks 3.031        
cufflinks 2.6        
cufflinks 3.188        
cufflinks 3.299        
cufflinks 1.705        
cufflinks 4.52        
cufflinks 3.08        
cufflinks 3.985        
cufflinks 2.956        
cufflinks 2.759        
cufflinks 4.425        
cufflinks 2.703        

0 Strain