Gene : Pp3c8_18800 P. patens v3.3
Defline:  (1 of 1) PTHR10169:SF48 - DNA GYRASE SUBUNIT A, CHLOROPLASTIC/MITOCHONDRIAL-RELATED Genomic Order:  861
Name:  ? Pp3c8_18800 Secondary Identifier:  ? PAC:32964989
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c8_18800 0.5kb upstream 0.5kb upstream 11571 true Chr08: 12448841-12460411 Physcomitrium patens
Pp3c8_18800 0.5kb upstream 0.5kb upstream 500 false Chr08: 12448841-12449340 Physcomitrium patens
Pp3c8_18800 0.5kb downstream 0.5kb downstream 11571 true Chr08: 12449341-12460911 Physcomitrium patens
Pp3c8_18800 0.5kb downstream 0.5kb downstream 500 false Chr08: 12460412-12460911 Physcomitrium patens
Pp3c8_18800 1.0kb upstream 1.0kb upstream 12071 true Chr08: 12448341-12460411 Physcomitrium patens
Pp3c8_18800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 12448341-12449340 Physcomitrium patens
Pp3c8_18800 1.0kb downstream 1.0kb downstream 12071 true Chr08: 12449341-12461411 Physcomitrium patens
Pp3c8_18800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 12460412-12461411 Physcomitrium patens
Pp3c8_18800 2.0kb upstream 2.0kb upstream 13071 true Chr08: 12447341-12460411 Physcomitrium patens
Pp3c8_18800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 12447341-12449340 Physcomitrium patens
Pp3c8_18800 2.0kb downstream 2.0kb downstream 13071 true Chr08: 12449341-12462411 Physcomitrium patens
Pp3c8_18800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 12460412-12462411 Physcomitrium patens
Pp3c8_18800 5.0kb upstream 5.0kb upstream 16071 true Chr08: 12444341-12460411 Physcomitrium patens
Pp3c8_18800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 12444341-12449340 Physcomitrium patens
Pp3c8_18800 5.0kb downstream 5.0kb downstream 16071 true Chr08: 12449341-12465411 Physcomitrium patens
Pp3c8_18800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 12460412-12465411 Physcomitrium patens
Pp3c8_18800 10.0kb upstream 10.0kb upstream 21071 true Chr08: 12439341-12460411 Physcomitrium patens
Pp3c8_18800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 12439341-12449340 Physcomitrium patens
Pp3c8_18800 10.0kb downstream 10.0kb downstream 21071 true Chr08: 12449341-12470411 Physcomitrium patens
Pp3c8_18800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 12460412-12470411 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121344648 5274 Embryophyte View MSA
123423766 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.566        
cufflinks 1.985        
cufflinks 1.916        
cufflinks 0.564       Low
cufflinks 1.088        
cufflinks 1.274        
cufflinks 1.917        
cufflinks 1.774        
cufflinks 1.2        
cufflinks 0.612       Low
cufflinks 0.619       Low
cufflinks 0.55       Low
cufflinks 1.241        
cufflinks 1.652        
cufflinks 1.346        
cufflinks 1.006        
cufflinks 1.199        
cufflinks 1.821        
cufflinks 1.857        
cufflinks 1.019        
cufflinks 2.143        
cufflinks 0.322       Low
cufflinks 1.759        
cufflinks 1.68        
cufflinks 2.603       High
cufflinks 2.188        
cufflinks 3.466       High
cufflinks 1.64        
cufflinks 0.709       Low
cufflinks 1.011        

0 Strain