Gene : Pp3c10_2220 P. patens v3.3
Defline:  (1 of 2) PTHR12231:SF111 - MATRIX-REMODELING-ASSOCIATED PROTEIN 8 Genomic Order:  79
Name:  ? Pp3c10_2220 Secondary Identifier:  ? PAC:32901661
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0 Pathways

Genomics

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Expression

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10 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c10_2220 0.5kb upstream 0.5kb upstream 2747 true Chr10: 1906586-1909332 Physcomitrium patens
Pp3c10_2220 0.5kb upstream 0.5kb upstream 500 false Chr10: 1906586-1907085 Physcomitrium patens
Pp3c10_2220 0.5kb downstream 0.5kb downstream 2747 true Chr10: 1907086-1909832 Physcomitrium patens
Pp3c10_2220 0.5kb downstream 0.5kb downstream 500 false Chr10: 1909333-1909832 Physcomitrium patens
Pp3c10_2220 1.0kb upstream 1.0kb upstream 3247 true Chr10: 1906086-1909332 Physcomitrium patens
Pp3c10_2220 1.0kb upstream 1.0kb upstream 1000 false Chr10: 1906086-1907085 Physcomitrium patens
Pp3c10_2220 1.0kb downstream 1.0kb downstream 3247 true Chr10: 1907086-1910332 Physcomitrium patens
Pp3c10_2220 1.0kb downstream 1.0kb downstream 1000 false Chr10: 1909333-1910332 Physcomitrium patens
Pp3c10_2220 2.0kb upstream 2.0kb upstream 4247 true Chr10: 1905086-1909332 Physcomitrium patens
Pp3c10_2220 2.0kb upstream 2.0kb upstream 2000 false Chr10: 1905086-1907085 Physcomitrium patens
Pp3c10_2220 2.0kb downstream 2.0kb downstream 4247 true Chr10: 1907086-1911332 Physcomitrium patens
Pp3c10_2220 2.0kb downstream 2.0kb downstream 2000 false Chr10: 1909333-1911332 Physcomitrium patens
Pp3c10_2220 5.0kb upstream 5.0kb upstream 7247 true Chr10: 1902086-1909332 Physcomitrium patens
Pp3c10_2220 5.0kb upstream 5.0kb upstream 5000 false Chr10: 1902086-1907085 Physcomitrium patens
Pp3c10_2220 5.0kb downstream 5.0kb downstream 7247 true Chr10: 1907086-1914332 Physcomitrium patens
Pp3c10_2220 5.0kb downstream 5.0kb downstream 5000 false Chr10: 1909333-1914332 Physcomitrium patens
Pp3c10_2220 10.0kb upstream 10.0kb upstream 12247 true Chr10: 1897086-1909332 Physcomitrium patens
Pp3c10_2220 10.0kb upstream 10.0kb upstream 10000 false Chr10: 1897086-1907085 Physcomitrium patens
Pp3c10_2220 10.0kb downstream 10.0kb downstream 12247 true Chr10: 1907086-1919332 Physcomitrium patens
Pp3c10_2220 10.0kb downstream 10.0kb downstream 10000 false Chr10: 1909333-1919332 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121345069 5274 Embryophyte View MSA
123428656 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 88.103     High  
cufflinks 170.528     High  
cufflinks 115.151     High  
cufflinks 198.635     High  
cufflinks 21.371     High  
cufflinks 64.102     High  
cufflinks 160.942     High  
cufflinks 115.506     High  
cufflinks 95.413     High  
cufflinks 201.867     High  
cufflinks 75.943     High  
cufflinks 175.427     High  
cufflinks 51.39     High  
cufflinks 214.29     High  
cufflinks 59.77     High  
cufflinks 216.094     High  
cufflinks 101.199     High  
cufflinks 190.323     High  
cufflinks 111.251     High  
cufflinks 1.976       Low
cufflinks 90.618     High  
cufflinks 3.565       Low
cufflinks 1.409       Low
cufflinks 103.002     High  
cufflinks 98.083     High  
cufflinks 4.047       Low
cufflinks 54.6     High  
cufflinks 7.969       Low
cufflinks 271.867     High High
cufflinks 15.647        

0 Strain