Gene : Aqcoe6G195300 A. coerulea v3.1
Defline:  (1 of 1) PTHR11777:SF14 - ALANINE--TRNA LIGASE, CHLOROPLASTIC-RELATED Genomic Order:  1953
Name:  ? Aqcoe6G195300 Secondary Identifier:  ? PAC:33064485
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Acoerulea TRNA-CHARGING-PWY Aquilegia coerulea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Aqcoe6G195300 0.5kb upstream 0.5kb upstream 10084 true Chr_06: 12916524-12926607 Aquilegia coerulea
Aqcoe6G195300 0.5kb upstream 0.5kb upstream 500 false Chr_06: 12926108-12926607 Aquilegia coerulea
Aqcoe6G195300 0.5kb downstream 0.5kb downstream 10084 true Chr_06: 12916024-12926107 Aquilegia coerulea
Aqcoe6G195300 0.5kb downstream 0.5kb downstream 500 false Chr_06: 12916024-12916523 Aquilegia coerulea
Aqcoe6G195300 1.0kb upstream 1.0kb upstream 10584 true Chr_06: 12916524-12927107 Aquilegia coerulea
Aqcoe6G195300 1.0kb upstream 1.0kb upstream 1000 false Chr_06: 12926108-12927107 Aquilegia coerulea
Aqcoe6G195300 1.0kb downstream 1.0kb downstream 10584 true Chr_06: 12915524-12926107 Aquilegia coerulea
Aqcoe6G195300 1.0kb downstream 1.0kb downstream 1000 false Chr_06: 12915524-12916523 Aquilegia coerulea
Aqcoe6G195300 2.0kb upstream 2.0kb upstream 11584 true Chr_06: 12916524-12928107 Aquilegia coerulea
Aqcoe6G195300 2.0kb upstream 2.0kb upstream 2000 false Chr_06: 12926108-12928107 Aquilegia coerulea
Aqcoe6G195300 2.0kb downstream 2.0kb downstream 11584 true Chr_06: 12914524-12926107 Aquilegia coerulea
Aqcoe6G195300 2.0kb downstream 2.0kb downstream 2000 false Chr_06: 12914524-12916523 Aquilegia coerulea
Aqcoe6G195300 5.0kb upstream 5.0kb upstream 14584 true Chr_06: 12916524-12931107 Aquilegia coerulea
Aqcoe6G195300 5.0kb upstream 5.0kb upstream 5000 false Chr_06: 12926108-12931107 Aquilegia coerulea
Aqcoe6G195300 5.0kb downstream 5.0kb downstream 14584 true Chr_06: 12911524-12926107 Aquilegia coerulea
Aqcoe6G195300 5.0kb downstream 5.0kb downstream 5000 false Chr_06: 12911524-12916523 Aquilegia coerulea
Aqcoe6G195300 10.0kb upstream 10.0kb upstream 19584 true Chr_06: 12916524-12936107 Aquilegia coerulea
Aqcoe6G195300 10.0kb upstream 10.0kb upstream 10000 false Chr_06: 12926108-12936107 Aquilegia coerulea
Aqcoe6G195300 10.0kb downstream 10.0kb downstream 19584 true Chr_06: 12906524-12926107 Aquilegia coerulea
Aqcoe6G195300 10.0kb downstream 10.0kb downstream 10000 false Chr_06: 12906524-12916523 Aquilegia coerulea

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122788872 5272 Eudicot View MSA
122048095 5273 Angiosperm View MSA
121348703 5274 Embryophyte View MSA
123425032 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain