Gene : Aqcoe5G129400 A. coerulea v3.1
Defline:  (1 of 4) PF00575//PF03876 - S1 RNA binding domain (S1) // SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 (SHS2_Rpb7-N) Genomic Order:  1294
Name:  ? Aqcoe5G129400 Secondary Identifier:  ? PAC:33086004
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Aqcoe5G129400 0.5kb upstream 0.5kb upstream 4181 true Chr_05: 7089079-7093259 Aquilegia coerulea
Aqcoe5G129400 0.5kb upstream 0.5kb upstream 500 false Chr_05: 7092760-7093259 Aquilegia coerulea
Aqcoe5G129400 0.5kb downstream 0.5kb downstream 4181 true Chr_05: 7088579-7092759 Aquilegia coerulea
Aqcoe5G129400 0.5kb downstream 0.5kb downstream 500 false Chr_05: 7088579-7089078 Aquilegia coerulea
Aqcoe5G129400 1.0kb upstream 1.0kb upstream 4681 true Chr_05: 7089079-7093759 Aquilegia coerulea
Aqcoe5G129400 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 7092760-7093759 Aquilegia coerulea
Aqcoe5G129400 1.0kb downstream 1.0kb downstream 4681 true Chr_05: 7088079-7092759 Aquilegia coerulea
Aqcoe5G129400 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 7088079-7089078 Aquilegia coerulea
Aqcoe5G129400 2.0kb upstream 2.0kb upstream 5681 true Chr_05: 7089079-7094759 Aquilegia coerulea
Aqcoe5G129400 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 7092760-7094759 Aquilegia coerulea
Aqcoe5G129400 2.0kb downstream 2.0kb downstream 5681 true Chr_05: 7087079-7092759 Aquilegia coerulea
Aqcoe5G129400 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 7087079-7089078 Aquilegia coerulea
Aqcoe5G129400 5.0kb upstream 5.0kb upstream 8681 true Chr_05: 7089079-7097759 Aquilegia coerulea
Aqcoe5G129400 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 7092760-7097759 Aquilegia coerulea
Aqcoe5G129400 5.0kb downstream 5.0kb downstream 8681 true Chr_05: 7084079-7092759 Aquilegia coerulea
Aqcoe5G129400 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 7084079-7089078 Aquilegia coerulea
Aqcoe5G129400 10.0kb upstream 10.0kb upstream 13681 true Chr_05: 7089079-7102759 Aquilegia coerulea
Aqcoe5G129400 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 7092760-7102759 Aquilegia coerulea
Aqcoe5G129400 10.0kb downstream 10.0kb downstream 13681 true Chr_05: 7079079-7092759 Aquilegia coerulea
Aqcoe5G129400 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 7079079-7089078 Aquilegia coerulea

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122789999 5272 Eudicot View MSA
122045109 5273 Angiosperm View MSA
121343808 5274 Embryophyte View MSA
123424516 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain