Gene : Aqcoe2G405000 A. coerulea v3.1

Defline:  (1 of 1) PTHR11680//PTHR11680:SF11 - SERINE HYDROXYMETHYLTRANSFERASE Genomic Order:  4050
Name:  ? Aqcoe2G405000 Secondary Identifier:  ? PAC:33057042

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Acoerulea GLYSYN-PWY Aquilegia coerulea pathologic  
Acoerulea PWY-2161 Aquilegia coerulea pathologic  
Acoerulea PWY-3841 Aquilegia coerulea pathologic  
Acoerulea SER-GLYSYN-PWY Aquilegia coerulea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Aqcoe2G405000 0.5kb upstream 0.5kb upstream 3338 true Chr_02: 41097705-41101042 Aquilegia coerulea
Aqcoe2G405000 0.5kb upstream 0.5kb upstream 500 false Chr_02: 41100543-41101042 Aquilegia coerulea
Aqcoe2G405000 0.5kb downstream 0.5kb downstream 3338 true Chr_02: 41097205-41100542 Aquilegia coerulea
Aqcoe2G405000 0.5kb downstream 0.5kb downstream 500 false Chr_02: 41097205-41097704 Aquilegia coerulea
Aqcoe2G405000 1.0kb upstream 1.0kb upstream 3838 true Chr_02: 41097705-41101542 Aquilegia coerulea
Aqcoe2G405000 1.0kb upstream 1.0kb upstream 1000 false Chr_02: 41100543-41101542 Aquilegia coerulea
Aqcoe2G405000 1.0kb downstream 1.0kb downstream 3838 true Chr_02: 41096705-41100542 Aquilegia coerulea
Aqcoe2G405000 1.0kb downstream 1.0kb downstream 1000 false Chr_02: 41096705-41097704 Aquilegia coerulea
Aqcoe2G405000 2.0kb upstream 2.0kb upstream 4838 true Chr_02: 41097705-41102542 Aquilegia coerulea
Aqcoe2G405000 2.0kb upstream 2.0kb upstream 2000 false Chr_02: 41100543-41102542 Aquilegia coerulea
Aqcoe2G405000 2.0kb downstream 2.0kb downstream 4838 true Chr_02: 41095705-41100542 Aquilegia coerulea
Aqcoe2G405000 2.0kb downstream 2.0kb downstream 2000 false Chr_02: 41095705-41097704 Aquilegia coerulea
Aqcoe2G405000 5.0kb upstream 5.0kb upstream 7838 true Chr_02: 41097705-41105542 Aquilegia coerulea
Aqcoe2G405000 5.0kb upstream 5.0kb upstream 5000 false Chr_02: 41100543-41105542 Aquilegia coerulea
Aqcoe2G405000 5.0kb downstream 5.0kb downstream 7838 true Chr_02: 41092705-41100542 Aquilegia coerulea
Aqcoe2G405000 5.0kb downstream 5.0kb downstream 5000 false Chr_02: 41092705-41097704 Aquilegia coerulea
Aqcoe2G405000 10.0kb upstream 10.0kb upstream 12838 true Chr_02: 41097705-41110542 Aquilegia coerulea
Aqcoe2G405000 10.0kb upstream 10.0kb upstream 10000 false Chr_02: 41100543-41110542 Aquilegia coerulea
Aqcoe2G405000 10.0kb downstream 10.0kb downstream 12838 true Chr_02: 41087705-41100542 Aquilegia coerulea
Aqcoe2G405000 10.0kb downstream 10.0kb downstream 10000 false Chr_02: 41087705-41097704 Aquilegia coerulea

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122786293 5272 Eudicot View MSA
122042145 5273 Angiosperm View MSA
121347378 5274 Embryophyte View MSA
123426459 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain