Protein Domain : IPR004162

Type:  Family Name:  E3 ubiquitin-protein ligase SIN-like
Description:  Proteins in this entry are E3 ubiquitin-protein ligases that mediate ubiquitination and subsequent proteasomal degradation of target proteins. Proteins in this entry include SINA and sinah from flies, SIAH1/2 from humans and SINAT from plants. The seven in absentia (sina) gene was first identified in Drosophila. The Drosophila Sina protein is essential for the determination of the R7 pathway in photoreceptor cell development: the loss of functional Sina results in the transformation of the R7 precursor cell to a non-neuronal cell type. The Sina protein contains an N-terminal RING finger domain C3HC4-type. Through this domain, Sina binds E2 ubiquitin-conjugating enzymes (UbcD1) Sina also interacts with Tramtrack (TTK88) via PHYL. Tramtrack is a transcriptional repressor that blocks photoreceptor determination, while PHYL down-regulates the activity of TTK88. In turn, the activity of PHYL requires the activation of the Sevenless receptor tyrosine kinase, a process essential for R7 determination. It is thought that Sina targets TTK88 for degradation, therefore promoting the R7 pathway. Murine and human homologues of Sina have also been identified. The human homologue SIAH1 [] also binds E2 enzymes (UbcH5) and through a series of physical interactions, targets beta-catenin for ubiquitin degradation. Siah-1 expression is enhanced by p53, itself promoted by DNA damage. Thus this pathway links DNA damage to beta-catenin degradation [, ]. Sina proteins, therefore, physically interact with a variety of proteins. The N-terminal RING finger domain that binds ubiquitin conjugating enzymes is a C3HC4-type, and does not form part of the alignment for this family. The remainder C-terminal part is involved in interactions with other proteins, and is included in this alignment. In addition to the Drosophila protein and mammalian homologues, whose similarity was noted previously, this family also includes putative homologues from Caenorhabditis elegans, Arabidopsis thaliana. Short Name:  SINA-like

0 Child Features

5 Contains

DB identifier Type Name
IPR001841 Domain Zinc finger, RING-type
IPR008974 Domain TRAF-like
IPR013010 Domain Zinc finger, SIAH-type
IPR018121 Domain Seven-in-absentia protein, TRAF-like domain
IPR013323 Domain SIAH-type domain

1 Cross References

Identifier
PTHR10315

0 Found In

3 GO Annotations

GO Term Gene Name
GO:0006511 IPR004162
GO:0007275 IPR004162
GO:0005634 IPR004162

3 Ontology Annotations

GO Term Gene Name
GO:0006511 IPR004162
GO:0007275 IPR004162
GO:0005634 IPR004162

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
97849 D8RML3 PAC:15413878 Selaginella moellendorffii 311  
98090 D8RPM6 PAC:15410729 Selaginella moellendorffii 318  
405881 D8QZZ5 PAC:15416280 Selaginella moellendorffii 558  
68563 D8QSN5 PAC:15415222 Selaginella moellendorffii 121  
evm.model.supercontig_116.13 PAC:16406267 Carica papaya 384  
evm.model.supercontig_119.92 PAC:16406614 Carica papaya 302  
evm.model.supercontig_223.11 PAC:16414011 Carica papaya 280  
evm.model.supercontig_3.84 PAC:16416871 Carica papaya 329  
evm.model.supercontig_3.85 PAC:16416872 Carica papaya 335  
evm.model.supercontig_85.49 PAC:16427484 Carica papaya 307  
29742.m001411 B9SBH0 PAC:16807642 Ricinus communis 326  
29742.m001413 B9SBH2 PAC:16807644 Ricinus communis 326  
29773.m000285 B9T076 PAC:16808297 Ricinus communis 217  
30024.m001712 B9RSF5 PAC:16815748 Ricinus communis 346  
30131.m007211 B9RGC2 PAC:16819032 Ricinus communis 305  
28748.m000215 B9T323 PAC:16801639 Ricinus communis 374  
28748.m000218 B9T326 PAC:16801642 Ricinus communis 218  
29491.m000092 B9T806 PAC:16802961 Ricinus communis 304  
Cucsa.317620.1 A0A0A0KQG8 PAC:16977153 Cucumis sativus 305  
Cucsa.317620.2 A0A0A0KQG8 PAC:16977154 Cucumis sativus 305  
Cucsa.108380.1 PAC:16959726 Cucumis sativus 269  
Cucsa.153380.1 A0A0A0KWV9 PAC:16964683 Cucumis sativus 326  
Cucsa.153380.2 A0A0A0KWV9 PAC:16964684 Cucumis sativus 326  
Cucsa.032130.1 A0A0A0LAJ0 PAC:16952404 Cucumis sativus 332  
Cucsa.032140.1 A0A0A0LC94 PAC:16952405 Cucumis sativus 331  
Cucsa.032140.2 A0A0A0LC94 PAC:16952406 Cucumis sativus 331  
Cucsa.034820.1 PAC:16952650 Cucumis sativus 119  
Cucsa.308040.3 A0A0A0KRN7 PAC:16976285 Cucumis sativus 304  
Cucsa.308040.4 A0A0A0KRN7 PAC:16976286 Cucumis sativus 304  
Cucsa.308040.1 A0A0A0KRN7 PAC:16976283 Cucumis sativus 304  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            9403064
            9267026
            11389839