Protein Domain : IPR016187

Type:  Domain Name:  C-type lectin fold
Description:  Lectins occur in plants, animals, bacteria and viruses. Initially described for their carbohydrate-binding activity [], they are now recognised as a more diverse group of proteins, some of which are involved in protein-protein, protein-lipid or protein-nucleic acid interactions []. There are at least twelve structural families of lectins, of which C-type (Ca+-dependent) lectins is one. C-type lectins can be further divided into seven subgroups based on additional non-lectin domains and gene structure: (I) hyalectans, (II) asialoglycoprotein receptors, (III) collectins, (IV) selectins, (V) NK group transmembrane receptors, (VI) macrophage mannose receptors, and (VII) simple (single domain) lectins [].This entry represents a structural domain found in C-type lectins, as well as in other proteins, including:The N-terminal domain of aerolysin [] and the N-terminal domain of the S2/S3 subunit of pertussis toxin [].The C-terminal domain of invasin [] and intimin [].Link domain, which includes the Link module of TSG-6 [] (a hyaladherin with important roles in inflammation and ovulation) and the hyaluronan binding domain of CD44 (which contains extra N-terminal beta-strand and C-terminal beta-hairpin) [].Endostatin [] and the endostatin domain of collagen alpha 1 (XV) [], these domains being decorated with many insertions in the common fold.The noncollagenous (NC1) domain of collagen IV, which consists of a duplication of the C-type lectin domain, with segment swapping within and between individual domains [].Sulphatase-modifying factors (C-alpha-formyglycine-generating enzyme), where the fold is decorated with many additional structures [, ].The C-terminal domain of the major tropism determinant (Mtd), where the fold is decorated with many additional structures, and has an overall similarity to the sulphatase modifying factor family but lacking the characteristic disulphide []. Short Name:  C-type_lectin_fold

4 Child Features

DB identifier Type Name
IPR005532 Domain Sulfatase-modifying factor enzyme
IPR016186 Domain C-type lectin-like
IPR005138 Domain Aerolysin/Pertussis toxin APT
IPR011448 Domain Domain of unknown function DUF1554

2 Contains

DB identifier Type Name
IPR001442 Repeat Collagen IV, non-collagenous
IPR018378 Conserved_site C-type lectin, conserved site

1 Cross References

Identifier
SSF56436

2 Found Ins

DB identifier Type Name
IPR002396 Family Selectin superfamily
IPR003899 Family Bordetella pertussis toxin B

0 GO Annotation

0 Ontology Annotations

0 Parent Features

662 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
82185 D8R0Q1 PAC:15408978 Selaginella moellendorffii 548  
440291 D8RAS3 PAC:15403440 Selaginella moellendorffii 703  
evm.model.supercontig_41.17 PAC:16419544 Carica papaya 430  
30063.m001401 B9S040 PAC:16816358 Ricinus communis 552  
Cucsa.134550.1 PAC:16962820 Cucumis sativus 557  
Cucsa.134550.2 PAC:16962821 Cucumis sativus 530  
orange1.1g008216m A0A067GPD2 PAC:18138681 Citrus sinensis 573  
orange1.1g008672m A0A067GF43 PAC:18138682 Citrus sinensis 557  
orange1.1g008698m A0A067GF43 PAC:18138683 Citrus sinensis 557  
orange1.1g008785m A0A067GC60 PAC:18138684 Citrus sinensis 553  
orange1.1g010309m A0A067GPD6 PAC:18138685 Citrus sinensis 513  
orange1.1g016754m A0A067GPN3 PAC:18138686 Citrus sinensis 383  
Thhalv10011366m V4MFY5 PAC:20184173 Eutrema salsugineum 552  
Ciclev10014781m V4W6V6 PAC:20816105 Citrus clementina 557  
Ciclev10014779m V4W6V6 PAC:20816106 Citrus clementina 557  
Ciclev10014946m V4TMZ8 PAC:20816107 Citrus clementina 513  
Lus10023500 PAC:23160533 Linum usitatissimum 542  
Lus10040381 PAC:23173888 Linum usitatissimum 541  
Potri.001G160300.3 PAC:27045199 Populus trichocarpa 517  
Potri.001G160300.4 PAC:27045200 Populus trichocarpa 516  
Potri.001G160300.2 U5GT82 PAC:27045198 Populus trichocarpa 544  
Potri.001G160300.1 U5GT82 PAC:27045197 Populus trichocarpa 544  
Gorai.002G163600.1 A0A0D2QDX7 PAC:26791887 Gossypium raimondii 550  
Gorai.002G163600.3 A0A0D2MBU8 PAC:26791889 Gossypium raimondii 534  
Gorai.002G163600.2 A0A0D2R772 PAC:26791888 Gossypium raimondii 547  
Gorai.011G277600.1 A0A0D2TEL3 PAC:26807177 Gossypium raimondii 286  
56981 C1E1S9 PAC:27397977 Micromonas sp RCC299 568  
94690 A4S2K2 PAC:27413785 Ostreococcus lucimarinus 819  
Thecc1EG006003t1 A0A061DVN0 PAC:27460474 Theobroma cacao 537  
Migut.M00213.1.p PAC:28948476 Mimulus guttatus 350  

15 Publications

First Author Title Year Journal Volume Pages PubMed ID
            14533786
            12223269
            15476922
            12011424
            10890451
            10514372
            7510043
            8637000
            16041070
            9724722
            12972412
            14992719
            15687489
            16170324
            966814