Protein Domain : IPR004152

Type:  Domain Name:  GAT domain
Description:  The GAT domain is a region of homology of ~130 residues, which is found in eukaryotic GGAs (for Golgi-localized, gamma ear-containing ADP ribosylationfactor (ARF)-binding proteins) and vertebrate TOMs (for target of myb). The GAT domain is found in its entirety only in GGAs, although, at the C terminusit shares partial sequence similarity with a short region of TOMs. The GAT domain is found in association with other domains, such as VHS and GAE. The GAT domain of GGAs serves as amolecular anchor of GGA to trans-Golgi network (TGN) membranes via its interaction with the GTP-bound form of a member of the ARF family of smallGTPases and can bind specifically to the Rab GTPase effector rabaptin5 and to ubiquitin [, , , ].The GGA-GAT domain possesses an all alpha-helical structure, composed of four helices arranged in a somewhat unusual topology, which has been called thehelical paper clip. The overall structure shows that the GAT domain has an elongated shape, in which the longest helix participates in twosmall independent subdomains: an N-terminal helix-loop-helix hook and a C- terminal three-helix bundle. The hook subdomain has been shown to be bothnecessary and sufficient for ARF-GTP binding and Golgi targeting of GGAs. The N-terminal hook subdomain contains a hydrophobic patch, which is found tointeract directly with ARF []. It has been proposed that this interactionmight stabilise the hook subdomain []. The C-terminal three-helix bundle isinvolved in the binding with Rabaptin5 and ubiquitin []. Short Name:  GAT_dom

0 Child Features

0 Contains

2 Cross Referencess

Identifier
PF03127
PS50909

1 Found In

DB identifier Type Name
IPR014645 Family Target of Myb protein 1

2 GO Annotations

GO Term Gene Name
GO:0006886 IPR004152
GO:0005622 IPR004152

2 Ontology Annotations

GO Term Gene Name
GO:0006886 IPR004152
GO:0005622 IPR004152

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
176673 D8S3Y5 PAC:15402764 Selaginella moellendorffii 556  
82329 D8QZY4 PAC:15410460 Selaginella moellendorffii 355  
89807 D8RBC3 PAC:15412345 Selaginella moellendorffii 397  
67275 D8RCW0 PAC:15409995 Selaginella moellendorffii 252  
44205 D8T3N0 PAC:15408920 Selaginella moellendorffii 373  
evm.model.supercontig_138.17 PAC:16408450 Carica papaya 399  
evm.model.supercontig_26.64 PAC:16415307 Carica papaya 314  
evm.model.supercontig_43.88 PAC:16420050 Carica papaya 396  
evm.model.supercontig_50.13 PAC:16421588 Carica papaya 258  
29718.m000132 B9T6F7 PAC:16806511 Ricinus communis 734  
29794.m003439 B9RS40 PAC:16808798 Ricinus communis 667  
30073.m002258 B9S215 PAC:16816841 Ricinus communis 395  
30225.m001702 B9RHN5 PAC:16824191 Ricinus communis 415  
29648.m001940 B9S2Q1 PAC:16804782 Ricinus communis 520  
29611.m000226 B9T1B0 PAC:16803670 Ricinus communis 378  
Cucsa.077250.1 PAC:16955921 Cucumis sativus 494  
Cucsa.077250.10 PAC:16955922 Cucumis sativus 486  
Cucsa.077250.9 A0A0A0KIF1 PAC:16955930 Cucumis sativus 487  
Cucsa.077250.2 A0A0A0KIF1 PAC:16955923 Cucumis sativus 487  
Cucsa.077250.4 A0A0A0KIF1 PAC:16955925 Cucumis sativus 487  
Cucsa.176860.1 A0A0A0LF51 PAC:16966942 Cucumis sativus 689  
Cucsa.176860.3 PAC:16966944 Cucumis sativus 643  
Cucsa.151290.1 A0A0A0K8S9 PAC:16964442 Cucumis sativus 490  
Cucsa.176860.2 PAC:16966943 Cucumis sativus 643  
Cucsa.017950.1 PAC:16951760 Cucumis sativus 399  
Cucsa.161410.1 PAC:16965502 Cucumis sativus 697  
Cucsa.312650.1 PAC:16976886 Cucumis sativus 663  
Cucsa.312650.2 PAC:16976887 Cucumis sativus 659  
orange1.1g014390m A0A067F6C8 PAC:18103652 Citrus sinensis 425  
orange1.1g014410m A0A067F6C8 PAC:18103653 Citrus sinensis 425  

4 Publications

First Author Title Year Journal Volume Pages PubMed ID
            11301005
            12636914
            12679809
            15457209