Gene : LOC_Os01g35080 O. sativa v7.0
Defline:  (1 of 461) PF04195 - Putative gypsy type transposon (Transposase_28) Genomic Order:  2257
Name:  ? LOC_Os01g35080 Secondary Identifier:  ? PAC:33123501
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os01g35080 0.5kb upstream 0.5kb upstream 2884 true Chr1: 19424200-19427083 Oryza sativa
LOC_Os01g35080 0.5kb upstream 0.5kb upstream 500 false Chr1: 19424200-19424699 Oryza sativa
LOC_Os01g35080 0.5kb downstream 0.5kb downstream 2884 true Chr1: 19424700-19427583 Oryza sativa
LOC_Os01g35080 0.5kb downstream 0.5kb downstream 500 false Chr1: 19427084-19427583 Oryza sativa
LOC_Os01g35080 1.0kb upstream 1.0kb upstream 3384 true Chr1: 19423700-19427083 Oryza sativa
LOC_Os01g35080 1.0kb upstream 1.0kb upstream 1000 false Chr1: 19423700-19424699 Oryza sativa
LOC_Os01g35080 1.0kb downstream 1.0kb downstream 3384 true Chr1: 19424700-19428083 Oryza sativa
LOC_Os01g35080 1.0kb downstream 1.0kb downstream 1000 false Chr1: 19427084-19428083 Oryza sativa
LOC_Os01g35080 2.0kb upstream 2.0kb upstream 4384 true Chr1: 19422700-19427083 Oryza sativa
LOC_Os01g35080 2.0kb upstream 2.0kb upstream 2000 false Chr1: 19422700-19424699 Oryza sativa
LOC_Os01g35080 2.0kb downstream 2.0kb downstream 4384 true Chr1: 19424700-19429083 Oryza sativa
LOC_Os01g35080 2.0kb downstream 2.0kb downstream 2000 false Chr1: 19427084-19429083 Oryza sativa
LOC_Os01g35080 5.0kb upstream 5.0kb upstream 7384 true Chr1: 19419700-19427083 Oryza sativa
LOC_Os01g35080 5.0kb upstream 5.0kb upstream 5000 false Chr1: 19419700-19424699 Oryza sativa
LOC_Os01g35080 5.0kb downstream 5.0kb downstream 7384 true Chr1: 19424700-19432083 Oryza sativa
LOC_Os01g35080 5.0kb downstream 5.0kb downstream 5000 false Chr1: 19427084-19432083 Oryza sativa
LOC_Os01g35080 10.0kb upstream 10.0kb upstream 12384 true Chr1: 19414700-19427083 Oryza sativa
LOC_Os01g35080 10.0kb upstream 10.0kb upstream 10000 false Chr1: 19414700-19424699 Oryza sativa
LOC_Os01g35080 10.0kb downstream 10.0kb downstream 12384 true Chr1: 19424700-19437083 Oryza sativa
LOC_Os01g35080 10.0kb downstream 10.0kb downstream 10000 false Chr1: 19427084-19437083 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121996241 5273 Angiosperm View MSA
124591012 5269 Grass View MSA
121266409 5274 Embryophyte View MSA
123304751 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain