Gene : LOC_Os01g27750 O. sativa v7.0
Defline:  (1 of 2) K13832 - 3-dehydroquinate dehydratase / shikimate dehydrogenase (aroDE, DHQ-SDH) Genomic Order:  1918
Name:  ? LOC_Os01g27750 Secondary Identifier:  ? PAC:33125649
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Osativa ARO-PWY Oryza sativa pathologic  
Osativa PWY-6163 Oryza sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os01g27750 0.5kb upstream 0.5kb upstream 14082 true Chr1: 15479468-15493549 Oryza sativa
LOC_Os01g27750 0.5kb upstream 0.5kb upstream 500 false Chr1: 15479468-15479967 Oryza sativa
LOC_Os01g27750 0.5kb downstream 0.5kb downstream 14082 true Chr1: 15479968-15494049 Oryza sativa
LOC_Os01g27750 0.5kb downstream 0.5kb downstream 500 false Chr1: 15493550-15494049 Oryza sativa
LOC_Os01g27750 1.0kb upstream 1.0kb upstream 14582 true Chr1: 15478968-15493549 Oryza sativa
LOC_Os01g27750 1.0kb upstream 1.0kb upstream 1000 false Chr1: 15478968-15479967 Oryza sativa
LOC_Os01g27750 1.0kb downstream 1.0kb downstream 14582 true Chr1: 15479968-15494549 Oryza sativa
LOC_Os01g27750 1.0kb downstream 1.0kb downstream 1000 false Chr1: 15493550-15494549 Oryza sativa
LOC_Os01g27750 2.0kb upstream 2.0kb upstream 15582 true Chr1: 15477968-15493549 Oryza sativa
LOC_Os01g27750 2.0kb upstream 2.0kb upstream 2000 false Chr1: 15477968-15479967 Oryza sativa
LOC_Os01g27750 2.0kb downstream 2.0kb downstream 15582 true Chr1: 15479968-15495549 Oryza sativa
LOC_Os01g27750 2.0kb downstream 2.0kb downstream 2000 false Chr1: 15493550-15495549 Oryza sativa
LOC_Os01g27750 5.0kb upstream 5.0kb upstream 18582 true Chr1: 15474968-15493549 Oryza sativa
LOC_Os01g27750 5.0kb upstream 5.0kb upstream 5000 false Chr1: 15474968-15479967 Oryza sativa
LOC_Os01g27750 5.0kb downstream 5.0kb downstream 18582 true Chr1: 15479968-15498549 Oryza sativa
LOC_Os01g27750 5.0kb downstream 5.0kb downstream 5000 false Chr1: 15493550-15498549 Oryza sativa
LOC_Os01g27750 10.0kb upstream 10.0kb upstream 23582 true Chr1: 15469968-15493549 Oryza sativa
LOC_Os01g27750 10.0kb upstream 10.0kb upstream 10000 false Chr1: 15469968-15479967 Oryza sativa
LOC_Os01g27750 10.0kb downstream 10.0kb downstream 23582 true Chr1: 15479968-15503549 Oryza sativa
LOC_Os01g27750 10.0kb downstream 10.0kb downstream 10000 false Chr1: 15493550-15503549 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570353 5269 Grass View MSA
122045026 5273 Angiosperm View MSA
121345779 5274 Embryophyte View MSA
123427556 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain