Gene : LOC_Os11g22440 O. sativa v7.0
Defline:  retrotransposon, putative, centromere-specific, expressed Genomic Order:  1391
Name:  ? LOC_Os11g22440 Secondary Identifier:  ? PAC:33164700
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os11g22440 0.5kb upstream 0.5kb upstream 3077 true Chr11: 12885961-12889037 Oryza sativa
LOC_Os11g22440 0.5kb upstream 0.5kb upstream 500 false Chr11: 12885961-12886460 Oryza sativa
LOC_Os11g22440 0.5kb downstream 0.5kb downstream 3077 true Chr11: 12886461-12889537 Oryza sativa
LOC_Os11g22440 0.5kb downstream 0.5kb downstream 500 false Chr11: 12889038-12889537 Oryza sativa
LOC_Os11g22440 1.0kb upstream 1.0kb upstream 3577 true Chr11: 12885461-12889037 Oryza sativa
LOC_Os11g22440 1.0kb upstream 1.0kb upstream 1000 false Chr11: 12885461-12886460 Oryza sativa
LOC_Os11g22440 1.0kb downstream 1.0kb downstream 3577 true Chr11: 12886461-12890037 Oryza sativa
LOC_Os11g22440 1.0kb downstream 1.0kb downstream 1000 false Chr11: 12889038-12890037 Oryza sativa
LOC_Os11g22440 2.0kb upstream 2.0kb upstream 4577 true Chr11: 12884461-12889037 Oryza sativa
LOC_Os11g22440 2.0kb upstream 2.0kb upstream 2000 false Chr11: 12884461-12886460 Oryza sativa
LOC_Os11g22440 2.0kb downstream 2.0kb downstream 4577 true Chr11: 12886461-12891037 Oryza sativa
LOC_Os11g22440 2.0kb downstream 2.0kb downstream 2000 false Chr11: 12889038-12891037 Oryza sativa
LOC_Os11g22440 5.0kb upstream 5.0kb upstream 7577 true Chr11: 12881461-12889037 Oryza sativa
LOC_Os11g22440 5.0kb upstream 5.0kb upstream 5000 false Chr11: 12881461-12886460 Oryza sativa
LOC_Os11g22440 5.0kb downstream 5.0kb downstream 7577 true Chr11: 12886461-12894037 Oryza sativa
LOC_Os11g22440 5.0kb downstream 5.0kb downstream 5000 false Chr11: 12889038-12894037 Oryza sativa
LOC_Os11g22440 10.0kb upstream 10.0kb upstream 12577 true Chr11: 12876461-12889037 Oryza sativa
LOC_Os11g22440 10.0kb upstream 10.0kb upstream 10000 false Chr11: 12876461-12886460 Oryza sativa
LOC_Os11g22440 10.0kb downstream 10.0kb downstream 12577 true Chr11: 12886461-12899037 Oryza sativa
LOC_Os11g22440 10.0kb downstream 10.0kb downstream 10000 false Chr11: 12889038-12899037 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994609 5273 Angiosperm View MSA
124584928 5269 Grass View MSA
121264830 5274 Embryophyte View MSA
123303259 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain