Gene : LOC_Os12g43130 O. sativa v7.0
Defline:  (1 of 3) K02291 - phytoene synthase (crtB) Genomic Order:  2635
Name:  ? LOC_Os12g43130 Secondary Identifier:  ? PAC:33151104
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Osativa CAROTENOID-PWY Oryza sativa pathologic  
Osativa PWY-6475 Oryza sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os12g43130 0.5kb upstream 0.5kb upstream 3612 true Chr12: 26780487-26784098 Oryza sativa
LOC_Os12g43130 0.5kb upstream 0.5kb upstream 500 false Chr12: 26783599-26784098 Oryza sativa
LOC_Os12g43130 0.5kb downstream 0.5kb downstream 3612 true Chr12: 26779987-26783598 Oryza sativa
LOC_Os12g43130 0.5kb downstream 0.5kb downstream 500 false Chr12: 26779987-26780486 Oryza sativa
LOC_Os12g43130 1.0kb upstream 1.0kb upstream 4112 true Chr12: 26780487-26784598 Oryza sativa
LOC_Os12g43130 1.0kb upstream 1.0kb upstream 1000 false Chr12: 26783599-26784598 Oryza sativa
LOC_Os12g43130 1.0kb downstream 1.0kb downstream 4112 true Chr12: 26779487-26783598 Oryza sativa
LOC_Os12g43130 1.0kb downstream 1.0kb downstream 1000 false Chr12: 26779487-26780486 Oryza sativa
LOC_Os12g43130 2.0kb upstream 2.0kb upstream 5112 true Chr12: 26780487-26785598 Oryza sativa
LOC_Os12g43130 2.0kb upstream 2.0kb upstream 2000 false Chr12: 26783599-26785598 Oryza sativa
LOC_Os12g43130 2.0kb downstream 2.0kb downstream 5112 true Chr12: 26778487-26783598 Oryza sativa
LOC_Os12g43130 2.0kb downstream 2.0kb downstream 2000 false Chr12: 26778487-26780486 Oryza sativa
LOC_Os12g43130 5.0kb upstream 5.0kb upstream 8112 true Chr12: 26780487-26788598 Oryza sativa
LOC_Os12g43130 5.0kb upstream 5.0kb upstream 5000 false Chr12: 26783599-26788598 Oryza sativa
LOC_Os12g43130 5.0kb downstream 5.0kb downstream 8112 true Chr12: 26775487-26783598 Oryza sativa
LOC_Os12g43130 5.0kb downstream 5.0kb downstream 5000 false Chr12: 26775487-26780486 Oryza sativa
LOC_Os12g43130 10.0kb upstream 10.0kb upstream 13112 true Chr12: 26780487-26793598 Oryza sativa
LOC_Os12g43130 10.0kb upstream 10.0kb upstream 10000 false Chr12: 26783599-26793598 Oryza sativa
LOC_Os12g43130 10.0kb downstream 10.0kb downstream 13112 true Chr12: 26770487-26783598 Oryza sativa
LOC_Os12g43130 10.0kb downstream 10.0kb downstream 10000 false Chr12: 26770487-26780486 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041269 5273 Angiosperm View MSA
124573872 5269 Grass View MSA
121345575 5274 Embryophyte View MSA
123426823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain