Gene : LOC_Os03g38110 O. sativa v7.0
Defline:  retrotransposon, putative, centromere-specific Genomic Order:  2619
Name:  ? LOC_Os03g38110 Secondary Identifier:  ? PAC:33133578
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os03g38110 0.5kb upstream 0.5kb upstream 1428 true Chr3: 21157177-21158604 Oryza sativa
LOC_Os03g38110 0.5kb upstream 0.5kb upstream 500 false Chr3: 21157177-21157676 Oryza sativa
LOC_Os03g38110 0.5kb downstream 0.5kb downstream 1428 true Chr3: 21157677-21159104 Oryza sativa
LOC_Os03g38110 0.5kb downstream 0.5kb downstream 500 false Chr3: 21158605-21159104 Oryza sativa
LOC_Os03g38110 1.0kb upstream 1.0kb upstream 1928 true Chr3: 21156677-21158604 Oryza sativa
LOC_Os03g38110 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21156677-21157676 Oryza sativa
LOC_Os03g38110 1.0kb downstream 1.0kb downstream 1928 true Chr3: 21157677-21159604 Oryza sativa
LOC_Os03g38110 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21158605-21159604 Oryza sativa
LOC_Os03g38110 2.0kb upstream 2.0kb upstream 2928 true Chr3: 21155677-21158604 Oryza sativa
LOC_Os03g38110 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21155677-21157676 Oryza sativa
LOC_Os03g38110 2.0kb downstream 2.0kb downstream 2928 true Chr3: 21157677-21160604 Oryza sativa
LOC_Os03g38110 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21158605-21160604 Oryza sativa
LOC_Os03g38110 5.0kb upstream 5.0kb upstream 5928 true Chr3: 21152677-21158604 Oryza sativa
LOC_Os03g38110 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21152677-21157676 Oryza sativa
LOC_Os03g38110 5.0kb downstream 5.0kb downstream 5928 true Chr3: 21157677-21163604 Oryza sativa
LOC_Os03g38110 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21158605-21163604 Oryza sativa
LOC_Os03g38110 10.0kb upstream 10.0kb upstream 10928 true Chr3: 21147677-21158604 Oryza sativa
LOC_Os03g38110 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21147677-21157676 Oryza sativa
LOC_Os03g38110 10.0kb downstream 10.0kb downstream 10928 true Chr3: 21157677-21168604 Oryza sativa
LOC_Os03g38110 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21158605-21168604 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994609 5273 Angiosperm View MSA
124584928 5269 Grass View MSA
121264830 5274 Embryophyte View MSA
123303259 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain