Gene : LOC_Os04g41530 O. sativa v7.0
Defline:  (1 of 4) 6.1.1.21 - Histidine--tRNA ligase / Histidyl-tRNA synthetase Genomic Order:  2271
Name:  ? LOC_Os04g41530 Secondary Identifier:  ? PAC:33108616
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Osativa TRNA-CHARGING-PWY Oryza sativa pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os04g41530 0.5kb upstream 0.5kb upstream 5111 true Chr4: 24630730-24635840 Oryza sativa
LOC_Os04g41530 0.5kb upstream 0.5kb upstream 500 false Chr4: 24630730-24631229 Oryza sativa
LOC_Os04g41530 0.5kb downstream 0.5kb downstream 5111 true Chr4: 24631230-24636340 Oryza sativa
LOC_Os04g41530 0.5kb downstream 0.5kb downstream 500 false Chr4: 24635841-24636340 Oryza sativa
LOC_Os04g41530 1.0kb upstream 1.0kb upstream 5611 true Chr4: 24630230-24635840 Oryza sativa
LOC_Os04g41530 1.0kb upstream 1.0kb upstream 1000 false Chr4: 24630230-24631229 Oryza sativa
LOC_Os04g41530 1.0kb downstream 1.0kb downstream 5611 true Chr4: 24631230-24636840 Oryza sativa
LOC_Os04g41530 1.0kb downstream 1.0kb downstream 1000 false Chr4: 24635841-24636840 Oryza sativa
LOC_Os04g41530 2.0kb upstream 2.0kb upstream 6611 true Chr4: 24629230-24635840 Oryza sativa
LOC_Os04g41530 2.0kb upstream 2.0kb upstream 2000 false Chr4: 24629230-24631229 Oryza sativa
LOC_Os04g41530 2.0kb downstream 2.0kb downstream 6611 true Chr4: 24631230-24637840 Oryza sativa
LOC_Os04g41530 2.0kb downstream 2.0kb downstream 2000 false Chr4: 24635841-24637840 Oryza sativa
LOC_Os04g41530 5.0kb upstream 5.0kb upstream 9611 true Chr4: 24626230-24635840 Oryza sativa
LOC_Os04g41530 5.0kb upstream 5.0kb upstream 5000 false Chr4: 24626230-24631229 Oryza sativa
LOC_Os04g41530 5.0kb downstream 5.0kb downstream 9611 true Chr4: 24631230-24640840 Oryza sativa
LOC_Os04g41530 5.0kb downstream 5.0kb downstream 5000 false Chr4: 24635841-24640840 Oryza sativa
LOC_Os04g41530 10.0kb upstream 10.0kb upstream 14611 true Chr4: 24621230-24635840 Oryza sativa
LOC_Os04g41530 10.0kb upstream 10.0kb upstream 10000 false Chr4: 24621230-24631229 Oryza sativa
LOC_Os04g41530 10.0kb downstream 10.0kb downstream 14611 true Chr4: 24631230-24645840 Oryza sativa
LOC_Os04g41530 10.0kb downstream 10.0kb downstream 10000 false Chr4: 24635841-24645840 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028801 5273 Angiosperm View MSA
124548769 5269 Grass Singleton cluster - no MSA
121298240 5274 Embryophyte View MSA
123336222 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain